STRINGSTRING
A1O7_01786 A1O7_01786 A1O7_03855 A1O7_03855 A1O7_03981 A1O7_03981 A1O7_04596 A1O7_04596 A1O7_03549 A1O7_03549 A1O7_09479 A1O7_09479 A1O7_10029 A1O7_10029 A1O7_08505 A1O7_08505 A1O7_08939 A1O7_08939 A1O7_06812 A1O7_06812 A1O7_07051 A1O7_07051 A1O7_09442 A1O7_09442 A1O7_07181 A1O7_07181 A1O7_07202 A1O7_07202 A1O7_07579 A1O7_07579 A1O7_07589 A1O7_07589 A1O7_09157 A1O7_09157 A1O7_07590 A1O7_07590 A1O7_09328 A1O7_09328 A1O7_07991 A1O7_07991 A1O7_07972 A1O7_07972 A1O7_08020 A1O7_08020 A1O7_08222 A1O7_08222 A1O7_05480 A1O7_05480 A1O7_09892 A1O7_09892 A1O7_05862 A1O7_05862 A1O7_06040 A1O7_06040 A1O7_08223 A1O7_08223 A1O7_06298 A1O7_06298 A1O7_08947 A1O7_08947 A1O7_04450 A1O7_04450 A1O7_04815 A1O7_04815 A1O7_04681 A1O7_04681 A1O7_04726 A1O7_04726 A1O7_04761 A1O7_04761 A1O7_05404 A1O7_05404 A1O7_02005 A1O7_02005 A1O7_02010 A1O7_02010 A1O7_05871 A1O7_05871 A1O7_02501 A1O7_02501 A1O7_03000 A1O7_03000 A1O7_03746 A1O7_03746 A1O7_03216 A1O7_03216 A1O7_03257 A1O7_03257 A1O7_03997 A1O7_03997 A1O7_09411 A1O7_09411 A1O7_05063 A1O7_05063 A1O7_09834 A1O7_09834 A1O7_04859 A1O7_04859 A1O7_00853 A1O7_00853 A1O7_01472 A1O7_01472 A1O7_01502 A1O7_01502 A1O7_08734 A1O7_08734 A1O7_02266 A1O7_02266 A1O7_08770 A1O7_08770 A1O7_02819 A1O7_02819 A1O7_02968 A1O7_02968 A1O7_03148 A1O7_03148 A1O7_02815 A1O7_02815 A1O7_03109 A1O7_03109 A1O7_07093 A1O7_07093 A1O7_07711 A1O7_07711 A1O7_07812 A1O7_07812 A1O7_00306 A1O7_00306 A1O7_00154 A1O7_00154 A1O7_01235 A1O7_01235 A1O7_00522 A1O7_00522 A1O7_06249 A1O7_06249
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O7_01786RING-type domain-containing protein. (276 aa)
A1O7_03855RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (516 aa)
A1O7_03981Plus3 domain-containing protein. (625 aa)
A1O7_04596Transcription initiation factor TFIID subunit 6. (450 aa)
A1O7_03549CFEM domain-containing protein. (283 aa)
A1O7_09479Uncharacterized protein. (681 aa)
A1O7_10029Uncharacterized protein; Belongs to the cyclin family. (546 aa)
A1O7_08505Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (241 aa)
A1O7_08939Uncharacterized protein. (449 aa)
A1O7_06812TAFII55_N domain-containing protein. (839 aa)
A1O7_07051DNA-directed RNA polymerase I, II, and III subunit RPABC2. (157 aa)
A1O7_09442FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (584 aa)
A1O7_07181Acyl_transf_3 domain-containing protein. (471 aa)
A1O7_07202Uncharacterized protein; Belongs to the cyclin family. (526 aa)
A1O7_07579Uncharacterized protein. (611 aa)
A1O7_07589Uncharacterized protein. (557 aa)
A1O7_09157DUF3591 domain-containing protein. (1119 aa)
A1O7_07590S1 domain-containing protein. (167 aa)
A1O7_09328Uncharacterized protein. (87 aa)
A1O7_07991DNA repair helicase rad15. (815 aa)
A1O7_07972TFIIB-type domain-containing protein. (356 aa)
A1O7_08020Uncharacterized protein. (265 aa)
A1O7_08222Uncharacterized protein. (279 aa)
A1O7_05480Uncharacterized protein. (548 aa)
A1O7_09892Uncharacterized protein. (691 aa)
A1O7_05862Uncharacterized protein. (1288 aa)
A1O7_06040Uncharacterized protein. (66 aa)
A1O7_08223Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
A1O7_06298Uncharacterized protein. (457 aa)
A1O7_08947DUF4211 domain-containing protein. (648 aa)
A1O7_04450Uncharacterized protein. (78 aa)
A1O7_04815Xaa-Pro aminopeptidase. (1028 aa)
A1O7_04681DNA excision repair protein ERCC-3. (848 aa)
A1O7_04726TAFII28 domain-containing protein. (355 aa)
A1O7_04761TFIIS N-terminal domain-containing protein. (420 aa)
A1O7_05404TFIID_20kDa domain-containing protein. (567 aa)
A1O7_02005DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1266 aa)
A1O7_02010DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1760 aa)
A1O7_05871CDC73_C domain-containing protein. (444 aa)
A1O7_02501DNA-directed RNA polymerase I, II, and III subunit RPABC5. (73 aa)
A1O7_03000Uncharacterized protein. (219 aa)
A1O7_03746Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1424 aa)
A1O7_03216Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (118 aa)
A1O7_03257CMGC/CDK protein kinase. (634 aa)
A1O7_03997RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (850 aa)
A1O7_09411Uncharacterized protein. (634 aa)
A1O7_05063Transcription initiation factor TFIID subunit 5. (772 aa)
A1O7_09834Nuclear cap-binding protein subunit 2. (177 aa)
A1O7_04859General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (493 aa)
A1O7_00853Uncharacterized protein. (472 aa)
A1O7_01472CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (422 aa)
A1O7_01502Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1095 aa)
A1O7_08734DNA-directed RNA polymerase II subunit RPB3. (334 aa)
A1O7_02266Uncharacterized protein. (375 aa)
A1O7_08770DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
A1O7_02819Uncharacterized protein. (311 aa)
A1O7_02968Uncharacterized protein. (359 aa)
A1O7_03148Uncharacterized protein. (848 aa)
A1O7_02815CYCLIN domain-containing protein; Belongs to the cyclin family. (402 aa)
A1O7_03109Uncharacterized protein. (1239 aa)
A1O7_07093RPOL4c domain-containing protein. (152 aa)
A1O7_07711TATA-box-binding protein. (265 aa)
A1O7_07812DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
A1O7_00306TFA2_Winged_2 domain-containing protein. (237 aa)
A1O7_00154TFIIE domain-containing protein. (366 aa)
A1O7_01235RNA_pol_L_2 domain-containing protein. (271 aa)
A1O7_00522BTB domain-containing protein. (965 aa)
A1O7_06249Uncharacterized protein. (387 aa)
Your Current Organism:
Cladophialophora yegresii
NCBI taxonomy Id: 1182544
Other names: C. yegresii CBS 114405, Cladophialophora yegresii CBS 114405
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.