53 items (Exophiala aquamarina) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A1O9_11928	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (231 aa)
	A1O9_10902	WD_REPEATS_REGION domain-containing protein. (508 aa)
	A1O9_11243	Uncharacterized protein. (268 aa)
	A1O9_10549	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (249 aa)
	A1O9_10798	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (429 aa)
	A1O9_10118	C2H2-type domain-containing protein. (117 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	A1O9_09611	ATP-dependent RNA helicase dbp9. (610 aa)
	A1O9_09987	Uncharacterized protein; Belongs to the DEAD box helicase family. (803 aa)
	A1O9_10250	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (565 aa)
	A1O9_09688	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (712 aa)
	A1O9_09888	CBF domain-containing protein. (1061 aa)
	A1O9_09178	F-box domain-containing protein. (342 aa)
	A1O9_09356	Uncharacterized protein. (288 aa)
	A1O9_12539	zf-LYAR domain-containing protein. (542 aa)
	A1O9_12245	WD_REPEATS_REGION domain-containing protein. (553 aa)
	A1O9_11909	Uncharacterized protein. (219 aa)
	A1O9_06878	Uncharacterized protein; Belongs to the DEAD box helicase family. (560 aa)
	A1O9_07923	PUM-HD domain-containing protein. (689 aa)
	A1O9_07593	Large subunit ribosomal protein L24e. (155 aa)
	A1O9_07201	Uncharacterized protein. (708 aa)
	A1O9_08064	RRM domain-containing protein. (561 aa)
	A1O9_11018	Uncharacterized protein. (392 aa)
	A1O9_05333	Uncharacterized protein. (387 aa)
	A1O9_10698	Uncharacterized protein. (760 aa)
	A1O9_05734	Uncharacterized protein. (232 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (867 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (789 aa)
	A1O9_06093	Uncharacterized protein. (806 aa)
	A1O9_06263	Ribosome biogenesis protein n. (261 aa)
	A1O9_05951	Uncharacterized protein. (1011 aa)
	A1O9_03675	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	A1O9_09177	Brix domain-containing protein. (329 aa)
	A1O9_04166	Valyl-tRNA synthetase. (380 aa)
	A1O9_04320	RRM domain-containing protein. (519 aa)
	A1O9_04807	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (697 aa)
	A1O9_04874	rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (122 aa)
	A1O9_05031	Uncharacterized protein; Belongs to the DEAD box helicase family. (754 aa)
	A1O9_08551	ATP-dependent RNA helicase DBP10. (918 aa)
	A1O9_07585	Uncharacterized protein. (773 aa)
	A1O9_04806	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (192 aa)
	A1O9_02363	Uncharacterized protein; Belongs to the DEAD box helicase family. (677 aa)
	A1O9_02515	Brix domain-containing protein. (448 aa)
	A1O9_07000	CP-type G domain-containing protein. (549 aa)
	A1O9_03214	Uncharacterized protein. (390 aa)
	A1O9_03311	Protein MAK16; Belongs to the MAK16 family. (329 aa)
	A1O9_03245	Uncharacterized protein. (214 aa)
	A1O9_00089	RNA helicase. (626 aa)
	A1O9_00787	Uncharacterized protein. (707 aa)
	A1O9_00300	SURF6 domain-containing protein. (474 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (666 aa)
	A1O9_01925	RNA helicase. (635 aa)
	A1O9_02286	Brix domain-containing protein. (447 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00089	A1O9_00300	A0A072PQT8	A0A072PSN5	RNA helicase.	SURF6 domain-containing protein.	0.901
A1O9_00089	A1O9_00787	A0A072PQT8	A0A072PRX0	RNA helicase.	Uncharacterized protein.	0.897
A1O9_00089	A1O9_01925	A0A072PQT8	A0A072PXP6	RNA helicase.	RNA helicase.	0.944
A1O9_00089	A1O9_02286	A0A072PQT8	A0A072PYP2	RNA helicase.	Brix domain-containing protein.	0.954
A1O9_00089	A1O9_02515	A0A072PQT8	A0A072PM43	RNA helicase.	Brix domain-containing protein.	0.990
A1O9_00089	A1O9_03214	A0A072PQT8	A0A072PP28	RNA helicase.	Uncharacterized protein.	0.974
A1O9_00089	A1O9_03245	A0A072PQT8	A0A072PPK6	RNA helicase.	Uncharacterized protein.	0.931
A1O9_00089	A1O9_03311	A0A072PQT8	A0A072PPD8	RNA helicase.	Protein MAK16; Belongs to the MAK16 family.	0.984
A1O9_00089	A1O9_03675	A0A072PQT8	A0A072PGG8	RNA helicase.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.995
A1O9_00089	A1O9_04166	A0A072PQT8	A0A072PHW8	RNA helicase.	Valyl-tRNA synthetase.	0.990
A1O9_00089	A1O9_04320	A0A072PQT8	A0A072PHX0	RNA helicase.	RRM domain-containing protein.	0.912
A1O9_00089	A1O9_04806	A0A072PQT8	A0A072PKU3	RNA helicase.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.992
A1O9_00089	A1O9_04807	A0A072PQT8	A0A072PIL4	RNA helicase.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.987
A1O9_00089	A1O9_04874	A0A072PQT8	A0A072PIS1	RNA helicase.	rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family.	0.422
A1O9_00089	A1O9_05031	A0A072PQT8	A0A072PJW9	RNA helicase.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.979
A1O9_00089	A1O9_05333	A0A072PQT8	A0A072PC35	RNA helicase.	Uncharacterized protein.	0.997
A1O9_00089	A1O9_05734	A0A072PQT8	A0A072PCL2	RNA helicase.	Uncharacterized protein.	0.987
A1O9_00089	A1O9_05951	A0A072PQT8	A0A072PFH0	RNA helicase.	Uncharacterized protein.	0.874
A1O9_00089	A1O9_06093	A0A072PQT8	A0A072PEH4	RNA helicase.	Uncharacterized protein.	0.941
A1O9_00089	A1O9_06263	A0A072PQT8	A0A072PF21	RNA helicase.	Ribosome biogenesis protein n.	0.974