17 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_00429	Uncharacterized protein. (305 aa)
	A1O9_04972	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
	A1O9_00310	zf-U1 domain-containing protein. (66 aa)
	A1O9_08250	Uncharacterized protein. (1783 aa)
	A1O9_08190	Small nuclear ribonucleoprotein Sm D2. (158 aa)
	A1O9_04188	Uncharacterized protein. (500 aa)
	A1O9_03839	Small nuclear ribonucleoprotein G. (80 aa)
	A1O9_01228	Suf domain-containing protein. (559 aa)
	A1O9_04294	PWI domain-containing protein. (789 aa)
	A1O9_12054	Small nuclear ribonucleoprotein B and B. (213 aa)
	A1O9_11329	Uncharacterized protein. (293 aa)
	A1O9_11164	Uncharacterized protein. (772 aa)
	A1O9_10489	RRM domain-containing protein. (384 aa)
	A1O9_09799	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A1O9_12620	Uncharacterized protein. (123 aa)
	A1O9_08491	Uncharacterized protein. (272 aa)
	A1O9_03128	Small nuclear ribonucleoprotein F. (91 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00310	A1O9_00429	A0A072PSP2	A0A072PRR9	zf-U1 domain-containing protein.	Uncharacterized protein.	0.965
A1O9_00310	A1O9_01228	A0A072PSP2	A0A072PTS8	zf-U1 domain-containing protein.	Suf domain-containing protein.	0.955
A1O9_00310	A1O9_03128	A0A072PSP2	A0A072PNU2	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein F.	0.993
A1O9_00310	A1O9_03839	A0A072PSP2	A0A072PGL2	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein G.	0.995
A1O9_00310	A1O9_04294	A0A072PSP2	A0A072PV61	zf-U1 domain-containing protein.	PWI domain-containing protein.	0.988
A1O9_00310	A1O9_04972	A0A072PSP2	A0A072PK38	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.993
A1O9_00310	A1O9_08190	A0A072PSP2	A0A072PIT9	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.997
A1O9_00310	A1O9_08250	A0A072PSP2	A0A072PIY7	zf-U1 domain-containing protein.	Uncharacterized protein.	0.914
A1O9_00310	A1O9_08491	A0A072PSP2	A0A072P7D7	zf-U1 domain-containing protein.	Uncharacterized protein.	0.981
A1O9_00310	A1O9_09799	A0A072PSP2	A0A072P1L0	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
A1O9_00310	A1O9_10489	A0A072PSP2	A0A072P063	zf-U1 domain-containing protein.	RRM domain-containing protein.	0.995
A1O9_00310	A1O9_11164	A0A072PSP2	A0A072NZB5	zf-U1 domain-containing protein.	Uncharacterized protein.	0.920
A1O9_00310	A1O9_11329	A0A072PSP2	A0A072NYJ6	zf-U1 domain-containing protein.	Uncharacterized protein.	0.973
A1O9_00310	A1O9_12054	A0A072PSP2	A0A072NW06	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein B and B.	0.967
A1O9_00310	A1O9_12620	A0A072PSP2	A0A072P6S5	zf-U1 domain-containing protein.	Uncharacterized protein.	0.875
A1O9_00429	A1O9_00310	A0A072PRR9	A0A072PSP2	Uncharacterized protein.	zf-U1 domain-containing protein.	0.965
A1O9_00429	A1O9_01228	A0A072PRR9	A0A072PTS8	Uncharacterized protein.	Suf domain-containing protein.	0.643
A1O9_00429	A1O9_03839	A0A072PRR9	A0A072PGL2	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.992
A1O9_00429	A1O9_04188	A0A072PRR9	A0A072PGW7	Uncharacterized protein.	Uncharacterized protein.	0.404
A1O9_00429	A1O9_04294	A0A072PRR9	A0A072PV61	Uncharacterized protein.	PWI domain-containing protein.	0.489