12 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_07156	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
	A1O9_02136	Uncharacterized protein. (469 aa)
	A1O9_01809	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1211 aa)
	A1O9_03331	DNA-directed RNA polymerase I and III subunit RPAC2. (79 aa)
	A1O9_02948	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1741 aa)
	A1O9_04883	DNA-directed RNA polymerase I and III subunit RPAC1. (373 aa)
	A1O9_05021	Uncharacterized protein. (119 aa)
	A1O9_10841	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	A1O9_10724	RPA43_OB domain-containing protein. (433 aa)
	A1O9_11031	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
	A1O9_07627	Uncharacterized protein. (80 aa)
	A1O9_11575	DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_01809	A1O9_02136	A0A072PVE9	A0A072PY77	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
A1O9_01809	A1O9_02948	A0A072PVE9	A0A072PNS4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A1O9_01809	A1O9_03331	A0A072PVE9	A0A072PPI6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I and III subunit RPAC2.	0.995
A1O9_01809	A1O9_04883	A0A072PVE9	A0A072PL08	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I and III subunit RPAC1.	0.999
A1O9_01809	A1O9_05021	A0A072PVE9	A0A072PJV8	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
A1O9_01809	A1O9_07156	A0A072PVE9	A0A072PAR2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.999
A1O9_01809	A1O9_07627	A0A072PVE9	A0A072P849	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
A1O9_01809	A1O9_10724	A0A072PVE9	A0A072P0F1	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPA43_OB domain-containing protein.	0.999
A1O9_01809	A1O9_10841	A0A072PVE9	A0A072PBJ2	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
A1O9_01809	A1O9_11031	A0A072PVE9	A0A072P1H4	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
A1O9_01809	A1O9_11575	A0A072PVE9	A0A072P9X3	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase I, II, and III subunit RPABC1.	0.999
A1O9_02136	A1O9_01809	A0A072PY77	A0A072PVE9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A1O9_02136	A1O9_02948	A0A072PY77	A0A072PNS4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A1O9_02136	A1O9_03331	A0A072PY77	A0A072PPI6	Uncharacterized protein.	DNA-directed RNA polymerase I and III subunit RPAC2.	0.992
A1O9_02136	A1O9_04883	A0A072PY77	A0A072PL08	Uncharacterized protein.	DNA-directed RNA polymerase I and III subunit RPAC1.	0.999
A1O9_02136	A1O9_05021	A0A072PY77	A0A072PJV8	Uncharacterized protein.	Uncharacterized protein.	0.999
A1O9_02136	A1O9_07156	A0A072PY77	A0A072PAR2	Uncharacterized protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.999
A1O9_02136	A1O9_07627	A0A072PY77	A0A072P849	Uncharacterized protein.	Uncharacterized protein.	0.999
A1O9_02136	A1O9_10724	A0A072PY77	A0A072P0F1	Uncharacterized protein.	RPA43_OB domain-containing protein.	0.999
A1O9_02136	A1O9_10841	A0A072PY77	A0A072PBJ2	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.998