27 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_12211	Endo-1,3(4)-beta-glucanase. (298 aa)
	A1O9_11329	Uncharacterized protein. (293 aa)
	A1O9_11164	Uncharacterized protein. (772 aa)
	A1O9_10489	RRM domain-containing protein. (384 aa)
	A1O9_09799	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A1O9_08649	Branchpoint-bridging protein. (563 aa)
	A1O9_08784	Matrin-type domain-containing protein. (512 aa)
	A1O9_12620	Uncharacterized protein. (123 aa)
	A1O9_07439	Matrin-type domain-containing protein. (237 aa)
	A1O9_07635	Uncharacterized protein. (1178 aa)
	A1O9_07562	Pre-mRNA-splicing factor clf1. (677 aa)
	A1O9_11646	PSP domain-containing protein. (587 aa)
	A1O9_06184	Uncharacterized protein. (531 aa)
	A1O9_03839	Small nuclear ribonucleoprotein G. (80 aa)
	A1O9_04188	Uncharacterized protein. (500 aa)
	A1O9_08190	Small nuclear ribonucleoprotein Sm D2. (158 aa)
	A1O9_00310	zf-U1 domain-containing protein. (66 aa)
	A1O9_04294	PWI domain-containing protein. (789 aa)
	A1O9_01228	Suf domain-containing protein. (559 aa)
	A1O9_08250	Uncharacterized protein. (1783 aa)
	A1O9_04780	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (579 aa)
	A1O9_04972	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (121 aa)
	A1O9_07165	Small nuclear ribonucleoprotein. (136 aa)
	A1O9_03166	Uncharacterized protein. (335 aa)
	A1O9_00959	SF3b1 domain-containing protein. (1228 aa)
	A1O9_12054	Small nuclear ribonucleoprotein B and B. (213 aa)
	A1O9_12006	RRM domain-containing protein. (198 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00310	A1O9_00959	A0A072PSP2	A0A072PSA4	zf-U1 domain-containing protein.	SF3b1 domain-containing protein.	0.986
A1O9_00310	A1O9_01228	A0A072PSP2	A0A072PTS8	zf-U1 domain-containing protein.	Suf domain-containing protein.	0.955
A1O9_00310	A1O9_03166	A0A072PSP2	A0A072PQH6	zf-U1 domain-containing protein.	Uncharacterized protein.	0.978
A1O9_00310	A1O9_03839	A0A072PSP2	A0A072PGL2	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein G.	0.995
A1O9_00310	A1O9_04294	A0A072PSP2	A0A072PV61	zf-U1 domain-containing protein.	PWI domain-containing protein.	0.988
A1O9_00310	A1O9_04780	A0A072PSP2	A0A072PJK4	zf-U1 domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.816
A1O9_00310	A1O9_04972	A0A072PSP2	A0A072PK38	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.993
A1O9_00310	A1O9_06184	A0A072PSP2	A0A072PG79	zf-U1 domain-containing protein.	Uncharacterized protein.	0.837
A1O9_00310	A1O9_07165	A0A072PSP2	A0A072PN59	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein.	0.916
A1O9_00310	A1O9_07439	A0A072PSP2	A0A072P6X9	zf-U1 domain-containing protein.	Matrin-type domain-containing protein.	0.951
A1O9_00310	A1O9_07635	A0A072PSP2	A0A072P7F2	zf-U1 domain-containing protein.	Uncharacterized protein.	0.872
A1O9_00310	A1O9_08190	A0A072PSP2	A0A072PIT9	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.997
A1O9_00310	A1O9_08250	A0A072PSP2	A0A072PIY7	zf-U1 domain-containing protein.	Uncharacterized protein.	0.914
A1O9_00310	A1O9_08649	A0A072PSP2	A0A072P5J8	zf-U1 domain-containing protein.	Branchpoint-bridging protein.	0.621
A1O9_00310	A1O9_08784	A0A072PSP2	A0A072P5K1	zf-U1 domain-containing protein.	Matrin-type domain-containing protein.	0.951
A1O9_00310	A1O9_09799	A0A072PSP2	A0A072P1L0	zf-U1 domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
A1O9_00310	A1O9_10489	A0A072PSP2	A0A072P063	zf-U1 domain-containing protein.	RRM domain-containing protein.	0.995
A1O9_00310	A1O9_11164	A0A072PSP2	A0A072NZB5	zf-U1 domain-containing protein.	Uncharacterized protein.	0.920
A1O9_00310	A1O9_11329	A0A072PSP2	A0A072NYJ6	zf-U1 domain-containing protein.	Uncharacterized protein.	0.973
A1O9_00310	A1O9_11646	A0A072PSP2	A0A072PA21	zf-U1 domain-containing protein.	PSP domain-containing protein.	0.975