STRINGSTRING
A1O9_13025 A1O9_13025 A1O9_12264 A1O9_12264 A1O9_12113 A1O9_12113 A1O9_12184 A1O9_12184 A1O9_12195 A1O9_12195 A1O9_10942 A1O9_10942 A1O9_10724 A1O9_10724 A1O9_11031 A1O9_11031 A1O9_09557 A1O9_09557 A1O9_09118 A1O9_09118 A1O9_09973 A1O9_09973 A1O9_09154 A1O9_09154 A1O9_08843 A1O9_08843 A1O9_08853 A1O9_08853 A1O9_09259 A1O9_09259 A1O9_08958 A1O9_08958 A1O9_08239 A1O9_08239 A1O9_08309 A1O9_08309 A1O9_08141 A1O9_08141 A1O9_08307 A1O9_08307 A1O9_07627 A1O9_07627 A1O9_08238 A1O9_08238 A1O9_08268 A1O9_08268 A1O9_07885 A1O9_07885 A1O9_07762 A1O9_07762 A1O9_06798 A1O9_06798 A1O9_06795 A1O9_06795 A1O9_11575 A1O9_11575 A1O9_07914 A1O9_07914 A1O9_07156 A1O9_07156 A1O9_10841 A1O9_10841 A1O9_05517 A1O9_05517 A1O9_05439 A1O9_05439 A1O9_10535 A1O9_10535 A1O9_10060 A1O9_10060 A1O9_05994 A1O9_05994 A1O9_05476 A1O9_05476 A1O9_05960 A1O9_05960 A1O9_10247 A1O9_10247 A1O9_03865 A1O9_03865 A1O9_04555 A1O9_04555 A1O9_04580 A1O9_04580 A1O9_04657 A1O9_04657 A1O9_04924 A1O9_04924 A1O9_04999 A1O9_04999 A1O9_08385 A1O9_08385 A1O9_05021 A1O9_05021 A1O9_07671 A1O9_07671 A1O9_04883 A1O9_04883 A1O9_02018 A1O9_02018 A1O9_02543 A1O9_02543 A1O9_02791 A1O9_02791 A1O9_07170 A1O9_07170 A1O9_02948 A1O9_02948 A1O9_03331 A1O9_03331 A1O9_00331 A1O9_00331 A1O9_00457 A1O9_00457 A1O9_03348 A1O9_03348 A1O9_03429 A1O9_03429 A1O9_00637 A1O9_00637 A1O9_00520 A1O9_00520 A1O9_00819 A1O9_00819 A1O9_01047 A1O9_01047 A1O9_00927 A1O9_00927 A1O9_01261 A1O9_01261 A1O9_01356 A1O9_01356 A1O9_00646 A1O9_00646 A1O9_03838 A1O9_03838 A1O9_03858 A1O9_03858 A1O9_01597 A1O9_01597 A1O9_01809 A1O9_01809 A1O9_01715 A1O9_01715 A1O9_02096 A1O9_02096 A1O9_02136 A1O9_02136 A1O9_00643 A1O9_00643 A1O9_01357 A1O9_01357 A1O9_01433 A1O9_01433
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O9_13025Transcription initiation factor TFIID subunit 5. (717 aa)
A1O9_12264DNA-directed RNA polymerase II subunit RPB3. (336 aa)
A1O9_12113DNA-directed RNA polymerase II subunit RPB7. (167 aa)
A1O9_12184HTH TFE/IIEalpha-type domain-containing protein. (471 aa)
A1O9_12195DNA excision repair protein ERCC-3. (846 aa)
A1O9_10942Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (267 aa)
A1O9_10724RPA43_OB domain-containing protein. (433 aa)
A1O9_11031DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
A1O9_09557DUF3591 domain-containing protein. (1153 aa)
A1O9_09118DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1233 aa)
A1O9_09973Uncharacterized protein. (271 aa)
A1O9_09154RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (572 aa)
A1O9_08843Serine/threonine protein kinase. (532 aa)
A1O9_08853Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (715 aa)
A1O9_09259Transcription initiation factor TFIID subunit 6. (450 aa)
A1O9_08958Uncharacterized protein. (490 aa)
A1O9_08239Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
A1O9_08309DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1421 aa)
A1O9_08141Uncharacterized protein. (252 aa)
A1O9_08307Uncharacterized protein. (364 aa)
A1O9_07627Uncharacterized protein. (80 aa)
A1O9_08238Uncharacterized protein. (324 aa)
A1O9_08268DUF4211 domain-containing protein. (736 aa)
A1O9_07885Uncharacterized protein. (351 aa)
A1O9_07762DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (697 aa)
A1O9_06798DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1763 aa)
A1O9_06795DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
A1O9_11575DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
A1O9_07914WD_REPEATS_REGION domain-containing protein. (352 aa)
A1O9_07156DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
A1O9_10841DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
A1O9_05517Uncharacterized protein. (634 aa)
A1O9_05439TFIIE beta domain-containing protein. (232 aa)
A1O9_10535DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (652 aa)
A1O9_10060Uncharacterized protein. (413 aa)
A1O9_05994DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
A1O9_05476UmuC domain-containing protein. (599 aa)
A1O9_05960Uncharacterized protein. (530 aa)
A1O9_10247RNA_pol_L_2 domain-containing protein. (412 aa)
A1O9_03865Med12 domain-containing protein. (1513 aa)
A1O9_04555DNA polymerase. (1449 aa)
A1O9_04580Transcription initiation factor TFIID subunit 12. (557 aa)
A1O9_04657Uncharacterized protein. (553 aa)
A1O9_04924DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (503 aa)
A1O9_04999RPOL4c domain-containing protein. (152 aa)
A1O9_08385Uncharacterized protein. (436 aa)
A1O9_05021Uncharacterized protein. (119 aa)
A1O9_07671Uncharacterized protein. (382 aa)
A1O9_04883DNA-directed RNA polymerase I and III subunit RPAC1. (373 aa)
A1O9_02018CYCLIN domain-containing protein; Belongs to the cyclin family. (388 aa)
A1O9_02543Uncharacterized protein. (609 aa)
A1O9_02791Uncharacterized protein. (236 aa)
A1O9_07170Uncharacterized protein. (451 aa)
A1O9_02948DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1741 aa)
A1O9_03331DNA-directed RNA polymerase I and III subunit RPAC2. (79 aa)
A1O9_00331Plus3 domain-containing protein. (610 aa)
A1O9_00457DNA primase; Belongs to the eukaryotic-type primase small subunit family. (528 aa)
A1O9_03348Uncharacterized protein. (336 aa)
A1O9_03429DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (299 aa)
A1O9_00637TAF8_C domain-containing protein. (317 aa)
A1O9_00520RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
A1O9_00819Uncharacterized protein. (586 aa)
A1O9_01047CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (421 aa)
A1O9_00927RING-type domain-containing protein. (270 aa)
A1O9_01261RPOL9 domain-containing protein. (111 aa)
A1O9_01356BTP domain-containing protein. (153 aa)
A1O9_00646Uncharacterized protein. (377 aa)
A1O9_03838Uncharacterized protein. (1288 aa)
A1O9_03858CDC73_C domain-containing protein. (443 aa)
A1O9_01597TAFII28 domain-containing protein. (351 aa)
A1O9_01809DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1211 aa)
A1O9_01715DNA-directed RNA polymerase III subunit RPC8. (187 aa)
A1O9_02096Uncharacterized protein. (1240 aa)
A1O9_02136Uncharacterized protein. (469 aa)
A1O9_00643DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1586 aa)
A1O9_01357TAFII55_N domain-containing protein. (736 aa)
A1O9_01433General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (466 aa)
Your Current Organism:
Exophiala aquamarina
NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918
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