33 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_07561	Nop domain-containing protein. (599 aa)
	A1O9_07892	Uncharacterized protein. (379 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A1O9_11646	PSP domain-containing protein. (587 aa)
	A1O9_07146	Pre-mRNA-splicing factor rse1. (1211 aa)
	A1O9_11152	Uncharacterized protein. (375 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
	A1O9_11033	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	A1O9_06060	WD_REPEATS_REGION domain-containing protein. (359 aa)
	A1O9_03769	Uncharacterized protein. (2226 aa)
	A1O9_03839	Small nuclear ribonucleoprotein G. (80 aa)
	A1O9_04277	Uncharacterized protein. (458 aa)
	A1O9_05121	Uncharacterized protein. (109 aa)
	A1O9_02930	CID domain-containing protein. (887 aa)
	A1O9_07165	Small nuclear ribonucleoprotein. (136 aa)
	A1O9_02365	C2H2-type domain-containing protein. (217 aa)
	A1O9_03166	Uncharacterized protein. (335 aa)
	A1O9_00757	Ubiquitin thiolesterase. (579 aa)
	A1O9_00968	Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
	A1O9_04294	PWI domain-containing protein. (789 aa)
	A1O9_01225	Pre-mRNA-splicing ATP-dependent RNA helicase prp28. (843 aa)
	A1O9_09221	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A1O9_09732	U2 small nuclear ribonucleoprotein A. (257 aa)
	A1O9_09799	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A1O9_11036	Sm domain-containing protein. (105 aa)
	A1O9_10754	MPN domain-containing protein. (2509 aa)
	A1O9_11714	RRM domain-containing protein. (116 aa)
	A1O9_11844	Uncharacterized protein. (941 aa)
	A1O9_12109	Serine/threonine-protein kinase PRP4. (501 aa)
	A1O9_12054	Small nuclear ribonucleoprotein B and B. (213 aa)
	A1O9_09320	GYF domain-containing protein. (458 aa)
	A1O9_08715	Uncharacterized protein. (666 aa)
	A1O9_08491	Uncharacterized protein. (272 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00757	A1O9_00968	A0A072PRV2	A0A072PUG6	Ubiquitin thiolesterase.	Splicing factor subunit; Belongs to the SF3B5 family.	0.674
A1O9_00757	A1O9_01225	A0A072PRV2	A0A072PV89	Ubiquitin thiolesterase.	Pre-mRNA-splicing ATP-dependent RNA helicase prp28.	0.955
A1O9_00757	A1O9_03166	A0A072PRV2	A0A072PQH6	Ubiquitin thiolesterase.	Uncharacterized protein.	0.693
A1O9_00757	A1O9_03769	A0A072PRV2	A0A072PGE3	Ubiquitin thiolesterase.	Uncharacterized protein.	0.840
A1O9_00757	A1O9_03839	A0A072PRV2	A0A072PGL2	Ubiquitin thiolesterase.	Small nuclear ribonucleoprotein G.	0.793
A1O9_00757	A1O9_05121	A0A072PRV2	A0A072PKA4	Ubiquitin thiolesterase.	Uncharacterized protein.	0.695
A1O9_00757	A1O9_06060	A0A072PRV2	A0A072PEE1	Ubiquitin thiolesterase.	WD_REPEATS_REGION domain-containing protein.	0.933
A1O9_00757	A1O9_07146	A0A072PRV2	A0A072PAQ2	Ubiquitin thiolesterase.	Pre-mRNA-splicing factor rse1.	0.744
A1O9_00757	A1O9_07165	A0A072PRV2	A0A072PN59	Ubiquitin thiolesterase.	Small nuclear ribonucleoprotein.	0.887
A1O9_00757	A1O9_07561	A0A072PRV2	A0A072P7Z6	Ubiquitin thiolesterase.	Nop domain-containing protein.	0.944
A1O9_00757	A1O9_08491	A0A072PRV2	A0A072P7D7	Ubiquitin thiolesterase.	Uncharacterized protein.	0.596
A1O9_00757	A1O9_08715	A0A072PRV2	A0A072P5R3	Ubiquitin thiolesterase.	Uncharacterized protein.	0.967
A1O9_00757	A1O9_09221	A0A072PRV2	A0A072P3X5	Ubiquitin thiolesterase.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.851
A1O9_00757	A1O9_09320	A0A072PRV2	A0A072P587	Ubiquitin thiolesterase.	GYF domain-containing protein.	0.721
A1O9_00757	A1O9_09732	A0A072PRV2	A0A072P2L0	Ubiquitin thiolesterase.	U2 small nuclear ribonucleoprotein A.	0.781
A1O9_00757	A1O9_09799	A0A072PRV2	A0A072P1L0	Ubiquitin thiolesterase.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.905
A1O9_00757	A1O9_10754	A0A072PRV2	A0A072P0H1	Ubiquitin thiolesterase.	MPN domain-containing protein.	0.948
A1O9_00757	A1O9_11033	A0A072PRV2	A0A072PC10	Ubiquitin thiolesterase.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.815
A1O9_00757	A1O9_11036	A0A072PRV2	A0A072P1I1	Ubiquitin thiolesterase.	Sm domain-containing protein.	0.775
A1O9_00757	A1O9_11646	A0A072PRV2	A0A072PA21	Ubiquitin thiolesterase.	PSP domain-containing protein.	0.747