15 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_08521	CYCLIN domain-containing protein; Belongs to the cyclin family. (371 aa)
	A1O9_04942	Homeobox domain-containing protein. (280 aa)
	A1O9_04982	Kexin. (853 aa)
	A1O9_02223	WD_REPEATS_REGION domain-containing protein. (302 aa)
	A1O9_02841	Uncharacterized protein. (432 aa)
	A1O9_12878	Uncharacterized protein. (679 aa)
	A1O9_05740	Uncharacterized protein. (669 aa)
	A1O9_11774	Homeobox domain-containing protein. (340 aa)
	A1O9_09628	Uncharacterized protein. (430 aa)
	A1O9_09109	Pre-mRNA-processing protein 45. (581 aa)
	A1O9_11950	CMGC/CDK/CDK8 protein kinase. (455 aa)
	A1O9_08053	BZIP domain-containing protein. (262 aa)
	A1O9_04775	Uncharacterized protein. (284 aa)
	A1O9_00613	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O9_01966	Uncharacterized protein. (834 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00613	A1O9_04775	A0A072Q401	A0A072PJK1	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.736
A1O9_00613	A1O9_09628	A0A072Q401	A0A072P3M9	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.629
A1O9_01966	A1O9_04942	A0A072PXT1	A0A072PK03	Uncharacterized protein.	Homeobox domain-containing protein.	0.525
A1O9_01966	A1O9_11774	A0A072PXT1	A0A072NYP8	Uncharacterized protein.	Homeobox domain-containing protein.	0.525
A1O9_04775	A1O9_00613	A0A072PJK1	A0A072Q401	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.736
A1O9_04775	A1O9_08053	A0A072PJK1	A0A072P9N0	Uncharacterized protein.	BZIP domain-containing protein.	0.736
A1O9_04942	A1O9_01966	A0A072PK03	A0A072PXT1	Homeobox domain-containing protein.	Uncharacterized protein.	0.525
A1O9_04942	A1O9_12878	A0A072PK03	A0A072NUJ6	Homeobox domain-containing protein.	Uncharacterized protein.	0.525
A1O9_05740	A1O9_08521	A0A072PQQ3	A0A072PJX0	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.647
A1O9_05740	A1O9_11950	A0A072PQQ3	A0A072P8Q5	Uncharacterized protein.	CMGC/CDK/CDK8 protein kinase.	0.689
A1O9_08053	A1O9_04775	A0A072P9N0	A0A072PJK1	BZIP domain-containing protein.	Uncharacterized protein.	0.736
A1O9_08053	A1O9_09628	A0A072P9N0	A0A072P3M9	BZIP domain-containing protein.	Uncharacterized protein.	0.629
A1O9_08521	A1O9_05740	A0A072PJX0	A0A072PQQ3	CYCLIN domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.647
A1O9_08521	A1O9_11950	A0A072PJX0	A0A072P8Q5	CYCLIN domain-containing protein; Belongs to the cyclin family.	CMGC/CDK/CDK8 protein kinase.	0.999
A1O9_09109	A1O9_09628	A0A072P4M8	A0A072P3M9	Pre-mRNA-processing protein 45.	Uncharacterized protein.	0.762
A1O9_09628	A1O9_00613	A0A072P3M9	A0A072Q401	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.629
A1O9_09628	A1O9_08053	A0A072P3M9	A0A072P9N0	Uncharacterized protein.	BZIP domain-containing protein.	0.629
A1O9_09628	A1O9_09109	A0A072P3M9	A0A072P4M8	Uncharacterized protein.	Pre-mRNA-processing protein 45.	0.762
A1O9_11774	A1O9_01966	A0A072NYP8	A0A072PXT1	Homeobox domain-containing protein.	Uncharacterized protein.	0.525
A1O9_11774	A1O9_12878	A0A072NYP8	A0A072NUJ6	Homeobox domain-containing protein.	Uncharacterized protein.	0.525