30 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_01027	14-3-3 family protein; Belongs to the 14-3-3 family. (280 aa)
	A1O9_01163	Uncharacterized protein. (463 aa)
	A1O9_00267	14-3-3 family protein; Belongs to the 14-3-3 family. (265 aa)
	A1O9_00613	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O9_12422	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (387 aa)
	A1O9_08942	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
	A1O9_08053	BZIP domain-containing protein. (262 aa)
	A1O9_05225	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (798 aa)
	A1O9_05984	BRO1 domain-containing protein. (799 aa)
	A1O9_05445	Uncharacterized protein. (271 aa)
	MDE1	Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). (235 aa)
	A1O9_10267	STE/STE20/YSK protein kinase. (675 aa)
	A1O9_06138	Protein phosphatase 3, regulatory subunit. (115 aa)
	A1O9_03797	BRO1 domain-containing protein. (1076 aa)
	A1O9_04092	Uncharacterized protein. (1611 aa)
	A1O9_04740	Peptidase_M48 domain-containing protein. (380 aa)
	A1O9_04775	Uncharacterized protein. (284 aa)
	A1O9_07540	Uncharacterized protein. (2221 aa)
	A1O9_02042	SAP domain-containing protein. (679 aa)
	A1O9_07886	Uncharacterized protein. (199 aa)
	A1O9_02359	Uncharacterized protein. (523 aa)
	A1O9_08696	Uncharacterized protein. (515 aa)
	A1O9_08940	Uncharacterized protein. (570 aa)
	A1O9_09124	Vacuolar protein sorting-associated protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (707 aa)
	A1O9_09236	STE/STE20/YSK protein kinase. (655 aa)
	A1O9_10260	Uncharacterized protein. (1592 aa)
	A1O9_10574	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (912 aa)
	A1O9_11123	Uncharacterized protein. (358 aa)
	A1O9_10855	DUF4045 domain-containing protein. (1636 aa)
	A1O9_12131	Histone H1/5. (236 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00267	A1O9_01027	A0A072Q346	A0A072PT48	14-3-3 family protein; Belongs to the 14-3-3 family.	14-3-3 family protein; Belongs to the 14-3-3 family.	0.741
A1O9_00267	A1O9_06138	A0A072Q346	A0A072PEM1	14-3-3 family protein; Belongs to the 14-3-3 family.	Protein phosphatase 3, regulatory subunit.	0.413
A1O9_00613	A1O9_02359	A0A072Q401	A0A072PM60	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.884
A1O9_00613	A1O9_03797	A0A072Q401	A0A072PFQ6	Ubiquitin-40S ribosomal protein S27a.	BRO1 domain-containing protein.	0.619
A1O9_00613	A1O9_04775	A0A072Q401	A0A072PJK1	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.736
A1O9_00613	A1O9_05225	A0A072Q401	A0A072PDG0	Ubiquitin-40S ribosomal protein S27a.	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.407
A1O9_00613	A1O9_05984	A0A072Q401	A0A072PDW4	Ubiquitin-40S ribosomal protein S27a.	BRO1 domain-containing protein.	0.448
A1O9_00613	A1O9_09124	A0A072Q401	A0A072P4P2	Ubiquitin-40S ribosomal protein S27a.	Vacuolar protein sorting-associated protein 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.407
A1O9_00613	A1O9_10260	A0A072Q401	A0A072P3L7	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.532
A1O9_00613	A1O9_10574	A0A072Q401	A0A072P0D6	Ubiquitin-40S ribosomal protein S27a.	Dynamin GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.407
A1O9_01027	A1O9_00267	A0A072PT48	A0A072Q346	14-3-3 family protein; Belongs to the 14-3-3 family.	14-3-3 family protein; Belongs to the 14-3-3 family.	0.741
A1O9_01027	A1O9_06138	A0A072PT48	A0A072PEM1	14-3-3 family protein; Belongs to the 14-3-3 family.	Protein phosphatase 3, regulatory subunit.	0.413
A1O9_02359	A1O9_00613	A0A072PM60	A0A072Q401	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.884
A1O9_02359	A1O9_08053	A0A072PM60	A0A072P9N0	Uncharacterized protein.	BZIP domain-containing protein.	0.884
A1O9_02359	A1O9_08940	A0A072PM60	A0A072P642	Uncharacterized protein.	Uncharacterized protein.	0.617
A1O9_02359	A1O9_08942	A0A072PM60	A0A072P7Q8	Uncharacterized protein.	Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.720
A1O9_02359	A1O9_10260	A0A072PM60	A0A072P3L7	Uncharacterized protein.	Uncharacterized protein.	0.865
A1O9_02359	A1O9_12422	A0A072PM60	A0A072P7C3	Uncharacterized protein.	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.743
A1O9_03797	A1O9_00613	A0A072PFQ6	A0A072Q401	BRO1 domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.619
A1O9_03797	A1O9_05445	A0A072PFQ6	A0A072PDZ3	BRO1 domain-containing protein.	Uncharacterized protein.	0.947