STRINGSTRING
A1O9_00613 A1O9_00613 A1O9_03532 A1O9_03532 A1O9_04359 A1O9_04359 A1O9_01165 A1O9_01165 A1O9_04189 A1O9_04189 A1O9_00766 A1O9_00766 A1O9_01261 A1O9_01261 A1O9_00927 A1O9_00927 A1O9_01047 A1O9_01047 A1O9_00520 A1O9_00520 A1O9_00334 A1O9_00334 A1O9_03343 A1O9_03343 A1O9_00184 A1O9_00184 A1O9_00106 A1O9_00106 A1O9_03349 A1O9_03349 A1O9_02928 A1O9_02928 A1O9_01893 A1O9_01893 A1O9_05093 A1O9_05093 A1O9_02203 A1O9_02203 A1O9_07926 A1O9_07926 A1O9_02133 A1O9_02133 A1O9_02018 A1O9_02018 A1O9_01901 A1O9_01901 A1O9_05021 A1O9_05021 A1O9_04327 A1O9_04327 A1O9_08385 A1O9_08385 A1O9_04999 A1O9_04999 A1O9_04147 A1O9_04147 A1O9_08285 A1O9_08285 A1O9_04543 A1O9_04543 A1O9_04241 A1O9_04241 A1O9_04190 A1O9_04190 A1O9_04138 A1O9_04138 A1O9_06318 A1O9_06318 A1O9_09895 A1O9_09895 A1O9_09820 A1O9_09820 A1O9_10247 A1O9_10247 A1O9_05783 A1O9_05783 A1O9_10500 A1O9_10500 A1O9_07378 A1O9_07378 A1O9_05540 A1O9_05540 A1O9_05475 A1O9_05475 A1O9_05354 A1O9_05354 A1O9_05517 A1O9_05517 A1O9_10841 A1O9_10841 A1O9_07156 A1O9_07156 A1O9_06912 A1O9_06912 A1O9_11575 A1O9_11575 A1O9_07049 A1O9_07049 A1O9_06795 A1O9_06795 A1O9_08053 A1O9_08053 A1O9_07828 A1O9_07828 A1O9_06798 A1O9_06798 A1O9_08493 A1O9_08493 A1O9_07627 A1O9_07627 A1O9_08193 A1O9_08193 A1O9_12270 A1O9_12270 A1O9_08552 A1O9_08552 A1O9_08417 A1O9_08417 A1O9_08192 A1O9_08192 A1O9_09685 A1O9_09685 A1O9_09938 A1O9_09938 A1O9_09312 A1O9_09312 A1O9_09520 A1O9_09520 A1O9_10449 A1O9_10449 A1O9_10379 A1O9_10379 A1O9_10752 A1O9_10752 A1O9_10817 A1O9_10817 A1O9_11455 A1O9_11455 A1O9_11181 A1O9_11181 A1O9_12186 A1O9_12186 A1O9_11685 A1O9_11685 A1O9_12113 A1O9_12113 A1O9_12146 A1O9_12146 A1O9_12264 A1O9_12264 A1O9_12676 A1O9_12676 A1O9_12963 A1O9_12963 A1O9_12195 A1O9_12195 A1O9_12114 A1O9_12114 A1O9_12214 A1O9_12214 A1O9_12204 A1O9_12204 A1O9_12267 A1O9_12267 A1O9_01433 A1O9_01433
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O9_00613Ubiquitin-40S ribosomal protein S27a. (154 aa)
A1O9_03532DNA excision repair protein ERCC-4. (947 aa)
A1O9_04359PCI domain-containing protein. (481 aa)
A1O9_01165Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1417 aa)
A1O9_04189Uncharacterized protein. (880 aa)
A1O9_00766Uncharacterized protein. (488 aa)
A1O9_01261RPOL9 domain-containing protein. (111 aa)
A1O9_00927RING-type domain-containing protein. (270 aa)
A1O9_01047CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (421 aa)
A1O9_00520RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
A1O9_00334Peptidyl-prolyl cis-trans isomerase D. (372 aa)
A1O9_03343Replication factor C subunit 4. (351 aa)
A1O9_00184DNA polymerase kappa subunit. (668 aa)
A1O9_00106WD_REPEATS_REGION domain-containing protein. (555 aa)
A1O9_03349MPN domain-containing protein. (460 aa)
A1O9_02928Uncharacterized protein. (532 aa)
A1O9_01893Poly [ADP-ribose] polymerase. (706 aa)
A1O9_05093Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)
A1O9_02203RING-box protein 1. (123 aa)
A1O9_07926N-acetyltransferase domain-containing protein. (302 aa)
A1O9_02133DNA helicase INO80. (1412 aa)
A1O9_02018CYCLIN domain-containing protein; Belongs to the cyclin family. (388 aa)
A1O9_01901UV excision repair protein Rad23. (399 aa)
A1O9_05021Uncharacterized protein. (119 aa)
A1O9_04327PCI domain-containing protein. (424 aa)
A1O9_08385Uncharacterized protein. (436 aa)
A1O9_04999RPOL4c domain-containing protein. (152 aa)
A1O9_04147AAA domain-containing protein. (397 aa)
A1O9_08285COP9 signalosome complex subunit 5. (369 aa)
A1O9_04543DNA excision repair protein ERCC-6. (1200 aa)
A1O9_04241DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (533 aa)
A1O9_04190Uncharacterized protein. (320 aa)
A1O9_04138Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (726 aa)
A1O9_06318Replication factor C subunit 1. (1076 aa)
A1O9_09895AAA domain-containing protein. (1070 aa)
A1O9_09820CPSF_A domain-containing protein. (1156 aa)
A1O9_10247RNA_pol_L_2 domain-containing protein. (412 aa)
A1O9_05783Peptidylprolyl isomerase. (154 aa)
A1O9_10500Pre-mRNA-processing factor 19. (494 aa)
A1O9_07378COP9 signalosome complex subunit 2. (508 aa)
A1O9_05540RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
A1O9_05475Uncharacterized protein. (239 aa)
A1O9_05354Replication factor C subunit 5. (354 aa)
A1O9_05517Uncharacterized protein. (634 aa)
A1O9_10841DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
A1O9_07156DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
A1O9_06912DNA excision repair protein ERCC-1. (375 aa)
A1O9_11575DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
A1O9_07049PCI domain-containing protein. (325 aa)
A1O9_06795DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
A1O9_08053BZIP domain-containing protein. (262 aa)
A1O9_07828Uncharacterized protein. (1001 aa)
A1O9_06798DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1763 aa)
A1O9_08493Pre-mRNA-splicing factor syf1. (849 aa)
A1O9_07627Uncharacterized protein. (80 aa)
A1O9_08193CULLIN_2 domain-containing protein; Belongs to the cullin family. (877 aa)
A1O9_12270YL1_C domain-containing protein. (218 aa)
A1O9_08552Replication factor A2. (280 aa)
A1O9_08417DNA polymerase delta subunit 4. (225 aa)
A1O9_08192Uncharacterized protein. (132 aa)
A1O9_09685DNA-repair protein complementing XP-A cells. (366 aa)
A1O9_09938Pre-mRNA-splicing factor isy1. (251 aa)
A1O9_09312Transcription elongation factor S-II. (305 aa)
A1O9_09520Uncharacterized protein. (347 aa)
A1O9_10449Uncharacterized protein. (508 aa)
A1O9_10379CBFD_NFYB_HMF domain-containing protein. (189 aa)
A1O9_10752Uncharacterized protein. (1098 aa)
A1O9_10817Poly [ADP-ribose] polymerase. (465 aa)
A1O9_11455DNA excision repair protein ERCC-5. (1372 aa)
A1O9_11181Uncharacterized protein. (147 aa)
A1O9_12186Zds_C domain-containing protein. (820 aa)
A1O9_11685DNA repair helicase rad15. (774 aa)
A1O9_12113DNA-directed RNA polymerase II subunit RPB7. (167 aa)
A1O9_12146USP domain-containing protein; Belongs to the peptidase C19 family. (1147 aa)
A1O9_12264DNA-directed RNA polymerase II subunit RPB3. (336 aa)
A1O9_12676BRCT domain-containing protein. (486 aa)
A1O9_12963Uncharacterized protein. (747 aa)
A1O9_12195DNA excision repair protein ERCC-3. (846 aa)
A1O9_12114Uncharacterized protein. (552 aa)
A1O9_12214Replication factor C subunit 3/5. (408 aa)
A1O9_12204Ubiquitin thiolesterase; Belongs to the peptidase C19 family. (1141 aa)
A1O9_12267Uncharacterized protein; Belongs to the actin family. (791 aa)
A1O9_01433General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (466 aa)
Your Current Organism:
Exophiala aquamarina
NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918
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