41 items (Exophiala aquamarina) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_12114	Uncharacterized protein. (552 aa)
	A1O9_01433	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (466 aa)
	A1O9_00613	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O9_04359	PCI domain-containing protein. (481 aa)
	A1O9_00766	Uncharacterized protein. (488 aa)
	A1O9_01261	RPOL9 domain-containing protein. (111 aa)
	A1O9_00927	RING-type domain-containing protein. (270 aa)
	A1O9_01047	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (421 aa)
	A1O9_00520	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
	A1O9_00106	WD_REPEATS_REGION domain-containing protein. (555 aa)
	A1O9_03349	MPN domain-containing protein. (460 aa)
	A1O9_02203	RING-box protein 1. (123 aa)
	A1O9_07926	N-acetyltransferase domain-containing protein. (302 aa)
	A1O9_02018	CYCLIN domain-containing protein; Belongs to the cyclin family. (388 aa)
	A1O9_05021	Uncharacterized protein. (119 aa)
	A1O9_04327	PCI domain-containing protein. (424 aa)
	A1O9_08385	Uncharacterized protein. (436 aa)
	A1O9_04999	RPOL4c domain-containing protein. (152 aa)
	A1O9_08285	COP9 signalosome complex subunit 5. (369 aa)
	A1O9_04543	DNA excision repair protein ERCC-6. (1200 aa)
	A1O9_04190	Uncharacterized protein. (320 aa)
	A1O9_09820	CPSF_A domain-containing protein. (1156 aa)
	A1O9_10247	RNA_pol_L_2 domain-containing protein. (412 aa)
	A1O9_05783	Peptidylprolyl isomerase. (154 aa)
	A1O9_07378	COP9 signalosome complex subunit 2. (508 aa)
	A1O9_05517	Uncharacterized protein. (634 aa)
	A1O9_10841	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	A1O9_07156	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
	A1O9_11575	DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
	A1O9_07049	PCI domain-containing protein. (325 aa)
	A1O9_06795	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
	A1O9_08053	BZIP domain-containing protein. (262 aa)
	A1O9_07828	Uncharacterized protein. (1001 aa)
	A1O9_06798	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1763 aa)
	A1O9_07627	Uncharacterized protein. (80 aa)
	A1O9_08193	CULLIN_2 domain-containing protein; Belongs to the cullin family. (877 aa)
	A1O9_10752	Uncharacterized protein. (1098 aa)
	A1O9_11685	DNA repair helicase rad15. (774 aa)
	A1O9_12195	DNA excision repair protein ERCC-3. (846 aa)
	A1O9_12113	DNA-directed RNA polymerase II subunit RPB7. (167 aa)
	A1O9_12264	DNA-directed RNA polymerase II subunit RPB3. (336 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00106	A1O9_00520	A0A072PPU3	A0A072PRZ9	WD_REPEATS_REGION domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.659
A1O9_00106	A1O9_00613	A0A072PPU3	A0A072Q401	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.654
A1O9_00106	A1O9_00766	A0A072PPU3	A0A072PU06	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.859
A1O9_00106	A1O9_00927	A0A072PPU3	A0A072PT73	WD_REPEATS_REGION domain-containing protein.	RING-type domain-containing protein.	0.668
A1O9_00106	A1O9_01047	A0A072PPU3	A0A072PT65	WD_REPEATS_REGION domain-containing protein.	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.	0.670
A1O9_00106	A1O9_01261	A0A072PPU3	A0A072PTA1	WD_REPEATS_REGION domain-containing protein.	RPOL9 domain-containing protein.	0.928
A1O9_00106	A1O9_01433	A0A072PPU3	A0A072Q6A4	WD_REPEATS_REGION domain-containing protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.784
A1O9_00106	A1O9_02018	A0A072PPU3	A0A072PL27	WD_REPEATS_REGION domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.714
A1O9_00106	A1O9_02203	A0A072PPU3	A0A072PLL3	WD_REPEATS_REGION domain-containing protein.	RING-box protein 1.	0.954
A1O9_00106	A1O9_03349	A0A072PPU3	A0A072PNZ3	WD_REPEATS_REGION domain-containing protein.	MPN domain-containing protein.	0.781
A1O9_00106	A1O9_04327	A0A072PPU3	A0A072PJJ2	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.779
A1O9_00106	A1O9_04359	A0A072PPU3	A0A072PVB2	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.770
A1O9_00106	A1O9_04543	A0A072PPU3	A0A072PIX7	WD_REPEATS_REGION domain-containing protein.	DNA excision repair protein ERCC-6.	0.967
A1O9_00106	A1O9_04999	A0A072PPU3	A0A072PJ47	WD_REPEATS_REGION domain-containing protein.	RPOL4c domain-containing protein.	0.921
A1O9_00106	A1O9_05021	A0A072PPU3	A0A072PJV8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.920
A1O9_00106	A1O9_05517	A0A072PPU3	A0A072PBV1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.659
A1O9_00106	A1O9_06795	A0A072PPU3	A0A072P9Q1	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.921
A1O9_00106	A1O9_06798	A0A072PPU3	A0A072P907	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.951
A1O9_00106	A1O9_07049	A0A072PPU3	A0A072P9S6	WD_REPEATS_REGION domain-containing protein.	PCI domain-containing protein.	0.749
A1O9_00106	A1O9_07156	A0A072PPU3	A0A072PAR2	WD_REPEATS_REGION domain-containing protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.920