STRINGSTRING
A1O9_03995 A1O9_03995 SLX1 SLX1 A1O9_08100 A1O9_08100 A1O9_05093 A1O9_05093 A1O9_00613 A1O9_00613 A1O9_09224 A1O9_09224 A1O9_11809 A1O9_11809 A1O9_09220 A1O9_09220 A1O9_08053 A1O9_08053
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O9_03995Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2300 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (408 aa)
A1O9_08100Nuclear transport factor 2. (120 aa)
A1O9_05093Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (607 aa)
A1O9_00613Ubiquitin-40S ribosomal protein S27a. (154 aa)
A1O9_09224Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (894 aa)
A1O9_11809Asparaginyl-tRNA synthetase. (572 aa)
A1O9_09220DRMBL domain-containing protein. (929 aa)
A1O9_08053BZIP domain-containing protein. (262 aa)
Your Current Organism:
Exophiala aquamarina
NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918
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