40 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_03128	Small nuclear ribonucleoprotein F. (91 aa)
	A1O9_03379	PWI domain-containing protein. (124 aa)
	A1O9_01713	Uncharacterized protein. (377 aa)
	A1O9_00152	G-patch_2 domain-containing protein. (440 aa)
	A1O9_10324	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	A1O9_09799	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	A1O9_10203	Uncharacterized protein. (349 aa)
	A1O9_09882	Fip1 domain-containing protein. (292 aa)
	A1O9_09299	Adenosinetriphosphatase. (990 aa)
	A1O9_08609	Slu7 domain-containing protein. (514 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (507 aa)
	A1O9_07501	WD_REPEATS_REGION domain-containing protein. (347 aa)
	A1O9_06698	Splicing factor U2AF 23 kDa subunit. (209 aa)
	A1O9_06724	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (534 aa)
	A1O9_07969	Apoptosis regulator BCL-W. (175 aa)
	A1O9_10882	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (267 aa)
	A1O9_10325	Uncharacterized protein. (401 aa)
	A1O9_03839	Small nuclear ribonucleoprotein G. (80 aa)
	A1O9_09192	Uncharacterized protein. (108 aa)
	A1O9_03477	Suf domain-containing protein. (1016 aa)
	A1O9_03127	Uncharacterized protein. (100 aa)
	A1O9_02815	Uncharacterized protein. (286 aa)
	A1O9_02604	Uncharacterized protein. (391 aa)
	A1O9_01574	Uncharacterized protein. (609 aa)
	A1O9_01308	Uncharacterized protein. (307 aa)
	A1O9_01164	Uncharacterized protein. (721 aa)
	A1O9_03434	Uncharacterized protein. (680 aa)
	A1O9_01063	WD_REPEATS_REGION domain-containing protein. (590 aa)
	A1O9_00921	Uncharacterized protein. (213 aa)
	A1O9_00579	Zn(2)-C6 fungal-type domain-containing protein. (721 aa)
	A1O9_00429	Uncharacterized protein. (305 aa)
	A1O9_12636	Uncharacterized protein. (668 aa)
	A1O9_12054	Small nuclear ribonucleoprotein B and B. (213 aa)
	A1O9_12211	Endo-1,3(4)-beta-glucanase. (298 aa)
	A1O9_03970	RRM domain-containing protein. (75 aa)
	A1O9_04505	RRM domain-containing protein. (294 aa)
	A1O9_04780	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (579 aa)
	A1O9_04825	SAP domain-containing protein. (256 aa)
	A1O9_01932	Uncharacterized protein. (311 aa)
	A1O9_04888	Uncharacterized protein. (311 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00152	A1O9_00921	A0A072Q2Q1	A0A072PT69	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.907
A1O9_00152	A1O9_01063	A0A072Q2Q1	A0A072PTK3	G-patch_2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.840
A1O9_00152	A1O9_01164	A0A072Q2Q1	A0A072PTV9	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.922
A1O9_00152	A1O9_01308	A0A072Q2Q1	A0A072PU12	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.896
A1O9_00152	A1O9_01574	A0A072Q2Q1	A0A072PUQ8	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.463
A1O9_00152	A1O9_01713	A0A072Q2Q1	A0A072Q728	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.743
A1O9_00152	A1O9_01932	A0A072Q2Q1	A0A072PKW0	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.511
A1O9_00152	A1O9_02604	A0A072Q2Q1	A0A072PZH3	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.442
A1O9_00152	A1O9_03128	A0A072Q2Q1	A0A072PNU2	G-patch_2 domain-containing protein.	Small nuclear ribonucleoprotein F.	0.688
A1O9_00152	A1O9_03379	A0A072Q2Q1	A0A072PP16	G-patch_2 domain-containing protein.	PWI domain-containing protein.	0.509
A1O9_00152	A1O9_03434	A0A072Q2Q1	A0A072PRB5	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.509
A1O9_00152	A1O9_03839	A0A072Q2Q1	A0A072PGL2	G-patch_2 domain-containing protein.	Small nuclear ribonucleoprotein G.	0.704
A1O9_00152	A1O9_03970	A0A072Q2Q1	A0A072PGY1	G-patch_2 domain-containing protein.	RRM domain-containing protein.	0.442
A1O9_00152	A1O9_04505	A0A072Q2Q1	A0A072PHP9	G-patch_2 domain-containing protein.	RRM domain-containing protein.	0.463
A1O9_00152	A1O9_04780	A0A072Q2Q1	A0A072PJK4	G-patch_2 domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.490
A1O9_00152	A1O9_04825	A0A072Q2Q1	A0A072PJN9	G-patch_2 domain-containing protein.	SAP domain-containing protein.	0.649
A1O9_00152	A1O9_07501	A0A072Q2Q1	A0A072P7T8	G-patch_2 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.921
A1O9_00152	A1O9_07969	A0A072Q2Q1	A0A072PAU6	G-patch_2 domain-containing protein.	Apoptosis regulator BCL-W.	0.442
A1O9_00152	A1O9_08609	A0A072Q2Q1	A0A072P5F6	G-patch_2 domain-containing protein.	Slu7 domain-containing protein.	0.738
A1O9_00152	A1O9_09192	A0A072Q2Q1	A0A072PGU1	G-patch_2 domain-containing protein.	Uncharacterized protein.	0.649