30 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_00251	SprT-like domain-containing protein. (814 aa)
	A1O9_11031	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
	A1O9_10724	RPA43_OB domain-containing protein. (433 aa)
	A1O9_10046	Histone H2B; Belongs to the histone H2B family. (140 aa)
	A1O9_13178	SprT-like domain-containing protein. (197 aa)
	A1O9_12195	DNA excision repair protein ERCC-3. (846 aa)
	A1O9_11685	DNA repair helicase rad15. (774 aa)
	A1O9_00520	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (499 aa)
	A1O9_01047	CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily. (421 aa)
	A1O9_00927	RING-type domain-containing protein. (270 aa)
	A1O9_01809	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1211 aa)
	A1O9_02136	Uncharacterized protein. (469 aa)
	A1O9_00848	Uncharacterized protein. (1552 aa)
	A1O9_01433	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (466 aa)
	A1O9_02018	CYCLIN domain-containing protein; Belongs to the cyclin family. (388 aa)
	A1O9_04883	DNA-directed RNA polymerase I and III subunit RPAC1. (373 aa)
	A1O9_01972	TATA-box-binding protein. (254 aa)
	A1O9_05081	BTB domain-containing protein. (830 aa)
	A1O9_05021	Uncharacterized protein. (119 aa)
	A1O9_08385	Uncharacterized protein. (436 aa)
	A1O9_05775	RRN7-type domain-containing protein. (700 aa)
	A1O9_05459	Large subunit ribosomal protein L40e. (207 aa)
	A1O9_05517	Uncharacterized protein. (634 aa)
	A1O9_10841	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	A1O9_07156	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
	A1O9_11575	DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
	A1O9_07627	Uncharacterized protein. (80 aa)
	A1O9_09808	Uncharacterized protein. (685 aa)
	A1O9_02948	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1741 aa)
	A1O9_00303	Uncharacterized protein. (860 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00251	A1O9_00520	A0A072PQD4	A0A072PRZ9	SprT-like domain-containing protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.477
A1O9_00251	A1O9_01809	A0A072PQD4	A0A072PVE9	SprT-like domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.581
A1O9_00251	A1O9_01972	A0A072PQD4	A0A072PKK8	SprT-like domain-containing protein.	TATA-box-binding protein.	0.734
A1O9_00251	A1O9_02136	A0A072PQD4	A0A072PY77	SprT-like domain-containing protein.	Uncharacterized protein.	0.584
A1O9_00251	A1O9_02948	A0A072PQD4	A0A072PNS4	SprT-like domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.595
A1O9_00251	A1O9_05081	A0A072PQD4	A0A072PK35	SprT-like domain-containing protein.	BTB domain-containing protein.	0.734
A1O9_00251	A1O9_09808	A0A072PQD4	A0A072P408	SprT-like domain-containing protein.	Uncharacterized protein.	0.651
A1O9_00251	A1O9_10841	A0A072PQD4	A0A072PBJ2	SprT-like domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.511
A1O9_00251	A1O9_11685	A0A072PQD4	A0A072NX55	SprT-like domain-containing protein.	DNA repair helicase rad15.	0.490
A1O9_00303	A1O9_00520	A0A072PR50	A0A072PRZ9	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.483
A1O9_00303	A1O9_00848	A0A072PR50	A0A072Q4P6	Uncharacterized protein.	Uncharacterized protein.	0.632
A1O9_00303	A1O9_00927	A0A072PR50	A0A072PT73	Uncharacterized protein.	RING-type domain-containing protein.	0.639
A1O9_00303	A1O9_01809	A0A072PR50	A0A072PVE9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.676
A1O9_00303	A1O9_01972	A0A072PR50	A0A072PKK8	Uncharacterized protein.	TATA-box-binding protein.	0.668
A1O9_00303	A1O9_02136	A0A072PR50	A0A072PY77	Uncharacterized protein.	Uncharacterized protein.	0.755
A1O9_00303	A1O9_02948	A0A072PR50	A0A072PNS4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.711
A1O9_00303	A1O9_04883	A0A072PR50	A0A072PL08	Uncharacterized protein.	DNA-directed RNA polymerase I and III subunit RPAC1.	0.753
A1O9_00303	A1O9_05081	A0A072PR50	A0A072PK35	Uncharacterized protein.	BTB domain-containing protein.	0.644
A1O9_00303	A1O9_10724	A0A072PR50	A0A072P0F1	Uncharacterized protein.	RPA43_OB domain-containing protein.	0.747
A1O9_00303	A1O9_11031	A0A072PR50	A0A072P1H4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.752