11 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_01968	UBIQUITIN_CONJUGAT_2 domain-containing protein. (367 aa)
	A1O9_02019	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family. (244 aa)
	A1O9_01885	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
	A1O9_02061	Uncharacterized protein. (397 aa)
	A1O9_02875	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family. (259 aa)
	A1O9_00613	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	A1O9_12080	Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family. (186 aa)
	A1O9_09484	Ubiquitin-conjugating enzyme E2 Z. (434 aa)
	A1O9_07536	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (280 aa)
	A1O9_08053	BZIP domain-containing protein. (262 aa)
	A1O9_04255	Ubiquitin-conjugating enzyme E2 W. (186 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_00613	A1O9_01885	A0A072Q401	A0A072PXL4	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	0.893
A1O9_00613	A1O9_02019	A0A072Q401	A0A072PM92	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	0.955
A1O9_00613	A1O9_02061	A0A072Q401	A0A072PY14	Ubiquitin-40S ribosomal protein S27a.	Uncharacterized protein.	0.893
A1O9_00613	A1O9_02875	A0A072Q401	A0A072Q0B9	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family.	0.946
A1O9_00613	A1O9_04255	A0A072Q401	A0A072PHR3	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 W.	0.797
A1O9_00613	A1O9_07536	A0A072Q401	A0A072P7W8	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.	0.905
A1O9_00613	A1O9_09484	A0A072Q401	A0A072P4Z0	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 Z.	0.741
A1O9_00613	A1O9_12080	A0A072Q401	A0A072NXJ2	Ubiquitin-40S ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.	0.673
A1O9_01885	A1O9_00613	A0A072PXL4	A0A072Q401	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-40S ribosomal protein S27a.	0.893
A1O9_01885	A1O9_02019	A0A072PXL4	A0A072PM92	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	0.706
A1O9_01885	A1O9_02875	A0A072PXL4	A0A072Q0B9	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family.	0.626
A1O9_01885	A1O9_07536	A0A072PXL4	A0A072P7W8	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.	0.619
A1O9_01885	A1O9_08053	A0A072PXL4	A0A072P9N0	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	BZIP domain-containing protein.	0.893
A1O9_01885	A1O9_09484	A0A072PXL4	A0A072P4Z0	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 Z.	0.627
A1O9_01885	A1O9_12080	A0A072PXL4	A0A072NXJ2	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.	0.695
A1O9_01968	A1O9_12080	A0A072PKY7	A0A072NXJ2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 8; Belongs to the ubiquitin-conjugating enzyme family.	0.442
A1O9_02019	A1O9_00613	A0A072PM92	A0A072Q401	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-40S ribosomal protein S27a.	0.955
A1O9_02019	A1O9_01885	A0A072PM92	A0A072PXL4	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.	0.706
A1O9_02019	A1O9_02061	A0A072PM92	A0A072PY14	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.691
A1O9_02019	A1O9_02875	A0A072PM92	A0A072Q0B9	Ubiquitin-conjugating enzyme (Huntingtin interacting protein 2); Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2 R; Belongs to the ubiquitin-conjugating enzyme family.	0.738