36 items (Exophiala aquamarina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1O9_01972	TATA-box-binding protein. (254 aa)
	A1O9_03221	Fork-head domain-containing protein. (695 aa)
	A1O9_03323	CMGC/CDK protein kinase. (690 aa)
	A1O9_01261	RPOL9 domain-containing protein. (111 aa)
	A1O9_01820	Murein transglycosylase. (241 aa)
	A1O9_02225	Uncharacterized protein. (408 aa)
	A1O9_07671	Uncharacterized protein. (382 aa)
	A1O9_02900	CYCLIN domain-containing protein; Belongs to the cyclin family. (468 aa)
	A1O9_03056	Uncharacterized protein. (380 aa)
	A1O9_12264	DNA-directed RNA polymerase II subunit RPB3. (336 aa)
	A1O9_12113	DNA-directed RNA polymerase II subunit RPB7. (167 aa)
	A1O9_12114	Uncharacterized protein. (552 aa)
	A1O9_10796	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (484 aa)
	A1O9_10046	Histone H2B; Belongs to the histone H2B family. (140 aa)
	A1O9_08853	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (715 aa)
	A1O9_08239	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
	A1O9_08826	Uncharacterized protein; Belongs to the cyclin family. (408 aa)
	A1O9_07627	Uncharacterized protein. (80 aa)
	A1O9_03304	GATA-type domain-containing protein. (937 aa)
	A1O9_08238	Uncharacterized protein. (324 aa)
	A1O9_07885	Uncharacterized protein. (351 aa)
	A1O9_06798	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1763 aa)
	A1O9_06795	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
	A1O9_11575	DNA-directed RNA polymerase I, II, and III subunit RPABC1. (238 aa)
	A1O9_11596	Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (357 aa)
	A1O9_07156	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (72 aa)
	A1O9_07047	Histone acetyltransferase. (407 aa)
	A1O9_10841	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	A1O9_06205	GATA-binding protein, other eukaryote. (269 aa)
	A1O9_10247	RNA_pol_L_2 domain-containing protein. (412 aa)
	A1O9_09511	Lysine-specific histone demethylase 1. (996 aa)
	A1O9_06637	Uncharacterized protein. (803 aa)
	A1O9_04762	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (532 aa)
	A1O9_04999	RPOL4c domain-containing protein. (152 aa)
	A1O9_05021	Uncharacterized protein. (119 aa)
	A1O9_05081	BTB domain-containing protein. (830 aa)

Your Current Organism:

Exophiala aquamarina

NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1O9_01261	A1O9_01972	A0A072PTA1	A0A072PKK8	RPOL9 domain-containing protein.	TATA-box-binding protein.	0.970
A1O9_01261	A1O9_02225	A0A072PTA1	A0A072PKN1	RPOL9 domain-containing protein.	Uncharacterized protein.	0.410
A1O9_01261	A1O9_02900	A0A072PTA1	A0A072PMP4	RPOL9 domain-containing protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.732
A1O9_01261	A1O9_03056	A0A072PTA1	A0A072PN24	RPOL9 domain-containing protein.	Uncharacterized protein.	0.410
A1O9_01261	A1O9_03323	A0A072PTA1	A0A072PR01	RPOL9 domain-containing protein.	CMGC/CDK protein kinase.	0.676
A1O9_01261	A1O9_04999	A0A072PTA1	A0A072PJ47	RPOL9 domain-containing protein.	RPOL4c domain-containing protein.	0.999
A1O9_01261	A1O9_05021	A0A072PTA1	A0A072PJV8	RPOL9 domain-containing protein.	Uncharacterized protein.	0.999
A1O9_01261	A1O9_05081	A0A072PTA1	A0A072PK35	RPOL9 domain-containing protein.	BTB domain-containing protein.	0.953
A1O9_01261	A1O9_06795	A0A072PTA1	A0A072P9Q1	RPOL9 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A1O9_01261	A1O9_06798	A0A072PTA1	A0A072P907	RPOL9 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
A1O9_01261	A1O9_07047	A0A072PTA1	A0A072PAT0	RPOL9 domain-containing protein.	Histone acetyltransferase.	0.448
A1O9_01261	A1O9_07156	A0A072PTA1	A0A072PAR2	RPOL9 domain-containing protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.999
A1O9_01261	A1O9_07627	A0A072PTA1	A0A072P849	RPOL9 domain-containing protein.	Uncharacterized protein.	0.999
A1O9_01261	A1O9_07671	A0A072PTA1	A0A072PKN9	RPOL9 domain-containing protein.	Uncharacterized protein.	0.988
A1O9_01261	A1O9_07885	A0A072PTA1	A0A072P8A6	RPOL9 domain-containing protein.	Uncharacterized protein.	0.956
A1O9_01261	A1O9_08238	A0A072PTA1	A0A072P866	RPOL9 domain-containing protein.	Uncharacterized protein.	0.948
A1O9_01261	A1O9_08239	A0A072PTA1	A0A072P5V9	RPOL9 domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.948
A1O9_01261	A1O9_08826	A0A072PTA1	A0A072P622	RPOL9 domain-containing protein.	Uncharacterized protein; Belongs to the cyclin family.	0.699
A1O9_01261	A1O9_08853	A0A072PTA1	A0A072P512	RPOL9 domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.995
A1O9_01261	A1O9_10046	A0A072PTA1	A0A072P1D9	RPOL9 domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.927