STRINGSTRING
A1O9_12541 A1O9_12541 A1O9_12129 A1O9_12129 A1O9_11901 A1O9_11901 PAN2 PAN2 A1O9_11799 A1O9_11799 A1O9_12145 A1O9_12145 A1O9_11902 A1O9_11902 A1O9_12043 A1O9_12043 A1O9_11042 A1O9_11042 A1O9_11340 A1O9_11340 A1O9_11190 A1O9_11190 A1O9_10361 A1O9_10361 A1O9_10150 A1O9_10150 A1O9_10486 A1O9_10486 A1O9_11036 A1O9_11036 A1O9_10751 A1O9_10751 A1O9_12927 A1O9_12927 A1O9_10193 A1O9_10193 A1O9_10418 A1O9_10418 A1O9_09221 A1O9_09221 A1O9_09028 A1O9_09028 A1O9_09344 A1O9_09344 A1O9_08870 A1O9_08870 A1O9_09255 A1O9_09255 A1O9_08186 A1O9_08186 A1O9_08092 A1O9_08092 A1O9_08520 A1O9_08520 A1O9_12452 A1O9_12452 A1O9_07640 A1O9_07640 A1O9_12240 A1O9_12240 A1O9_12260 A1O9_12260 A1O9_07622 A1O9_07622 A1O9_07840 A1O9_07840 A1O9_07777 A1O9_07777 A1O9_07703 A1O9_07703 LSM8 LSM8 A1O9_06873 A1O9_06873 A1O9_06791 A1O9_06791 PAN3 PAN3 A1O9_07914 A1O9_07914 A1O9_05191 A1O9_05191 LSM4 LSM4 A1O9_11023 A1O9_11023 A1O9_07243 A1O9_07243 A1O9_07288 A1O9_07288 A1O9_05579 A1O9_05579 A1O9_05609 A1O9_05609 A1O9_05942 A1O9_05942 A1O9_05375 A1O9_05375 A1O9_06208 A1O9_06208 A1O9_06343 A1O9_06343 A1O9_06492 A1O9_06492 A1O9_03629 A1O9_03629 A1O9_03720 A1O9_03720 A1O9_09187 A1O9_09187 A1O9_08939 A1O9_08939 A1O9_04577 A1O9_04577 A1O9_08270 A1O9_08270 A1O9_05011 A1O9_05011 A1O9_07751 A1O9_07751 A1O9_02473 A1O9_02473 A1O9_05068 A1O9_05068 A1O9_02689 A1O9_02689 A1O9_02328 A1O9_02328 A1O9_02379 A1O9_02379 A1O9_07165 A1O9_07165 A1O9_03121 A1O9_03121 A1O9_02462 A1O9_02462 A1O9_03139 A1O9_03139 A1O9_02683 A1O9_02683 A1O9_03425 A1O9_03425 A1O9_03180 A1O9_03180 LSM1 LSM1 A1O9_05427 A1O9_05427 A1O9_00121 A1O9_00121 A1O9_00283 A1O9_00283 A1O9_00722 A1O9_00722 A1O9_00782 A1O9_00782 A1O9_00802 A1O9_00802 A1O9_00555 A1O9_00555 A1O9_03663 A1O9_03663 A1O9_01233 A1O9_01233 A1O9_00746 A1O9_00746 A1O9_04139 A1O9_04139 A1O9_01170 A1O9_01170 A1O9_01280 A1O9_01280 A1O9_01836 A1O9_01836 A1O9_02011 A1O9_02011 A1O9_02016 A1O9_02016 A1O9_02392 A1O9_02392 A1O9_00067 A1O9_00067 A1O9_00909 A1O9_00909
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1O9_12541T-complex protein 1 subunit beta. (528 aa)
A1O9_12129T-complex protein 1 subunit delta. (549 aa)
A1O9_11901Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1181 aa)
A1O9_11799YL1_C domain-containing protein. (705 aa)
A1O9_12145Uncharacterized protein. (574 aa)
A1O9_11902Uncharacterized protein. (86 aa)
A1O9_12043Uncharacterized protein; Belongs to the RNR ribonuclease family. (1011 aa)
A1O9_11042Sec2p domain-containing protein. (279 aa)
A1O9_11340Exosome complex component RRP45. (291 aa)
A1O9_11190Uncharacterized protein. (390 aa)
A1O9_10361PAT1 domain-containing protein. (808 aa)
A1O9_10150Exosome complex component RRP4. (348 aa)
A1O9_10486S1 motif domain-containing protein. (207 aa)
A1O9_11036Sm domain-containing protein. (105 aa)
A1O9_10751RNase_PH domain-containing protein. (257 aa)
A1O9_12927Uncharacterized protein. (1016 aa)
A1O9_10193cobW domain-containing protein. (380 aa)
A1O9_10418Uncharacterized protein. (688 aa)
A1O9_09221U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O9_09028Uncharacterized protein. (398 aa)
A1O9_09344Heat shock protein 60; Belongs to the chaperonin (HSP60) family. (585 aa)
A1O9_08870Importin N-terminal domain-containing protein. (1043 aa)
A1O9_092555'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1415 aa)
A1O9_08186Uncharacterized protein. (1337 aa)
A1O9_08092Nudix hydrolase domain-containing protein. (791 aa)
A1O9_08520T-complex protein 1 subunit alpha. (567 aa)
A1O9_12452CobW C-terminal domain-containing protein. (545 aa)
A1O9_07640Uncharacterized protein. (426 aa)
A1O9_12240Uncharacterized protein. (337 aa)
A1O9_12260Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (775 aa)
A1O9_07622KH_dom_type_1 domain-containing protein. (245 aa)
A1O9_07840Uncharacterized protein. (432 aa)
A1O9_07777ANK_REP_REGION domain-containing protein. (211 aa)
A1O9_07703RNB domain-containing protein. (1356 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A1O9_06873Uncharacterized protein. (625 aa)
A1O9_06791RNB domain-containing protein. (993 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (642 aa)
A1O9_07914WD_REPEATS_REGION domain-containing protein. (352 aa)
A1O9_05191ANK_REP_REGION domain-containing protein. (1156 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
A1O9_11023Uncharacterized protein. (520 aa)
A1O9_07243Uncharacterized protein. (513 aa)
A1O9_07288Cellular nucleic acid-binding protein. (232 aa)
A1O9_05579Uncharacterized protein. (486 aa)
A1O9_05609Uncharacterized protein. (1270 aa)
A1O9_05942Uncharacterized protein. (317 aa)
A1O9_05375Uncharacterized protein. (267 aa)
A1O9_062082-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (449 aa)
A1O9_06343Hsp70-like protein; Belongs to the heat shock protein 70 family. (677 aa)
A1O9_06492Nudix hydrolase domain-containing protein. (235 aa)
A1O9_03629NOT2_3_5 domain-containing protein. (218 aa)
A1O9_03720Uncharacterized protein. (779 aa)
A1O9_09187Uncharacterized protein. (608 aa)
A1O9_08939RNase_PH domain-containing protein. (363 aa)
A1O9_04577Uncharacterized protein. (389 aa)
A1O9_08270RNase_PH domain-containing protein. (311 aa)
A1O9_05011Endo/exonuclease/phosphatase domain-containing protein. (749 aa)
A1O9_07751Uncharacterized protein. (1073 aa)
A1O9_02473Uncharacterized protein. (2304 aa)
A1O9_05068T-complex protein 1 subunit epsilon. (550 aa)
A1O9_02689Uncharacterized protein. (327 aa)
A1O9_023285'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1026 aa)
A1O9_02379Uncharacterized protein. (476 aa)
A1O9_07165Small nuclear ribonucleoprotein. (136 aa)
A1O9_03121Uncharacterized protein. (1444 aa)
A1O9_02462NTP_transf_9 domain-containing protein. (163 aa)
A1O9_03139ANK_REP_REGION domain-containing protein. (647 aa)
A1O9_02683RNase_PH domain-containing protein. (352 aa)
A1O9_03425Uncharacterized protein. (474 aa)
A1O9_03180ATPase. (285 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (193 aa)
A1O9_05427RNase_PH domain-containing protein. (271 aa)
A1O9_00121NTP_transf_9 domain-containing protein. (286 aa)
A1O9_00283Uncharacterized protein. (618 aa)
A1O9_007222-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. (565 aa)
A1O9_00782T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (558 aa)
A1O9_00802Uncharacterized protein. (1430 aa)
A1O9_00555HRDC domain-containing protein. (834 aa)
A1O9_03663T-complex protein 1 subunit zeta. (541 aa)
A1O9_01233Enolase. (438 aa)
A1O9_00746Small nuclear ribonucleoprotein. (98 aa)
A1O9_04139HA2 domain-containing protein. (1271 aa)
A1O9_01170ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (801 aa)
A1O9_01280Uncharacterized protein. (1601 aa)
A1O9_01836PH domain-containing protein. (1142 aa)
A1O9_02011YjeF. (227 aa)
A1O9_02016Uncharacterized protein. (1226 aa)
A1O9_02392T-complex protein 1 subunit gamma. (515 aa)
A1O9_00067ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (517 aa)
A1O9_00909Uncharacterized protein. (633 aa)
Your Current Organism:
Exophiala aquamarina
NCBI taxonomy Id: 1182545
Other names: E. aquamarina CBS 119918, Exophiala aquamarina CBS 119918
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