5 items (Deinococcus puniceus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANE43584.1	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	ANE43585.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
	ANE43586.1	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	ANE43587.1	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	ANE43588.1	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)

Your Current Organism:

Deinococcus puniceus

NCBI taxonomy Id: 1182568
Other names: D. puniceus, Deinococcus puniceus Lee et al. 2017, Deinococcus sp. DY1, JCM 18576, KCTC 33027, strain DY1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANE43584.1	ANE43585.1	SU48_07175	SU48_07180	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43584.1	ANE43586.1	SU48_07175	SU48_07185	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
ANE43584.1	ANE43587.1	SU48_07175	SU48_07190	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
ANE43584.1	ANE43588.1	SU48_07175	SU48_07195	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
ANE43585.1	ANE43584.1	SU48_07180	SU48_07175	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43585.1	ANE43586.1	SU48_07180	SU48_07185	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43585.1	ANE43587.1	SU48_07180	SU48_07190	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43585.1	ANE43588.1	SU48_07180	SU48_07195	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
ANE43586.1	ANE43584.1	SU48_07185	SU48_07175	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
ANE43586.1	ANE43585.1	SU48_07185	SU48_07180	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43586.1	ANE43587.1	SU48_07185	SU48_07190	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
ANE43586.1	ANE43588.1	SU48_07185	SU48_07195	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
ANE43587.1	ANE43584.1	SU48_07190	SU48_07175	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
ANE43587.1	ANE43585.1	SU48_07190	SU48_07180	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
ANE43587.1	ANE43586.1	SU48_07190	SU48_07185	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
ANE43587.1	ANE43588.1	SU48_07190	SU48_07195	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
ANE43588.1	ANE43584.1	SU48_07195	SU48_07175	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	Streptomycin biosynthesis protein StrI; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
ANE43588.1	ANE43585.1	SU48_07195	SU48_07180	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
ANE43588.1	ANE43586.1	SU48_07195	SU48_07185	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
ANE43588.1	ANE43587.1	SU48_07195	SU48_07190	Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783