(5 nodes) Xenobiotic metabolic process network (Deinococcus swuensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIZ46513.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
	AIZ45425.1	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
	AIZ45426.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AIZ45427.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
	paaA	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)

Your Current Organism:

Deinococcus swuensis

NCBI taxonomy Id: 1182571
Other names: D. swuensis, Deinococcus sp. DY59, Deinococcus swuensis Lee et al. 2015, JCM 18581, KCTC 33033, strain DY59

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIZ45425.1	AIZ45426.1	QR90_10495	QR90_10500	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIZ45425.1	AIZ45427.1	QR90_10495	QR90_10505	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIZ45425.1	AIZ46513.1	QR90_10495	QR90_07010	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
AIZ45425.1	paaA	QR90_10495	QR90_10510	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AIZ45426.1	AIZ45425.1	QR90_10500	QR90_10495	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIZ45426.1	AIZ45427.1	QR90_10500	QR90_10505	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIZ45426.1	AIZ46513.1	QR90_10500	QR90_07010	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
AIZ45426.1	paaA	QR90_10500	QR90_10510	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
AIZ45427.1	AIZ45425.1	QR90_10505	QR90_10495	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIZ45427.1	AIZ45426.1	QR90_10505	QR90_10500	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AIZ45427.1	AIZ46513.1	QR90_10505	QR90_07010	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AIZ45427.1	paaA	QR90_10505	QR90_10510	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AIZ46513.1	AIZ45425.1	QR90_07010	QR90_10495	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
AIZ46513.1	AIZ45426.1	QR90_07010	QR90_10500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
AIZ46513.1	AIZ45427.1	QR90_07010	QR90_10505	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AIZ46513.1	paaA	QR90_07010	QR90_10510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
paaA	AIZ45425.1	QR90_10510	QR90_10495	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
paaA	AIZ45426.1	QR90_10510	QR90_10500	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
paaA	AIZ45427.1	QR90_10510	QR90_10505	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
paaA	AIZ46513.1	QR90_10510	QR90_07010	ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967