STRINGSTRING
Py04_0191 Py04_0191 Py04_0199 Py04_0199 Py04_0387 Py04_0387 Py04_0695 Py04_0695 Py04_0710 Py04_0710 Py04_1076 Py04_1076 Py04_1077 Py04_1077 Py04_1078 Py04_1078 Py04_1082 Py04_1082 Py04_1084 Py04_1084 Py04_1276 Py04_1276 Py04_1327 Py04_1327 Py04_1388 Py04_1388 Py04_1410 Py04_1410 Py04_1668 Py04_1668 Py04_1719 Py04_1719
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Py04_0191methylmalonyl-CoA epimerase; COG0346. (134 aa)
Py04_0199methylmalony-CoA mutase; COG2185. (143 aa)
Py04_0387Putative succinyl-coA synthetase alpha subunit related protein; COG1042. (437 aa)
Py04_06954-aminobutyrate aminotransferase; COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)
Py04_0710Hypothetical protein; COG1042. (457 aa)
Py04_1076Pyruvate ferredoxin oxidoreductase subunit beta; COG1013. (331 aa)
Py04_1077Pyruvate ferredoxin oxidoreductase subunit alpha; COG0674. (396 aa)
Py04_1078Pyuvate ferredoxin oxidoreductase subunit delta; COG1144. (105 aa)
Py04_1082Pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; COG1014. (185 aa)
Py04_1084acetyl-CoA acetyltransferase; COG0183. (388 aa)
Py04_1276methylmalonyl-CoA mutase, subunit alpha; COG1884. (562 aa)
Py04_13274-aminobutyrate aminotransferase; COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (454 aa)
Py04_13884-aminobutyrate aminotransferase; COG0160; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)
Py04_1410ADP forming acetyl coenzyme A synthetase; COG1042. (411 aa)
Py04_1668acetyl-CoA synthetase I subunit beta; COG1042. (232 aa)
Py04_1719Putative acetyl-CoA synthetase subunit beta; COG1042. (252 aa)
Your Current Organism:
Pyrococcus sp. ST04
NCBI taxonomy Id: 1183377
Other names: P. sp. ST04
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