STRINGSTRING
ppcA ppcA Py04_0173 Py04_0173 Py04_0191 Py04_0191 Py04_0199 Py04_0199 Py04_0356 Py04_0356 Py04_0357 Py04_0357 Py04_0931 Py04_0931 Py04_1076 Py04_1076 Py04_1077 Py04_1077 Py04_1078 Py04_1078 Py04_1082 Py04_1082 Py04_1084 Py04_1084 Py04_1276 Py04_1276 Py04_1549 Py04_1549 Py04_1550 Py04_1550 Py04_1551 Py04_1551 Py04_1552 Py04_1552 Py04_1553 Py04_1553 Py04_1554 Py04_1554 Py04_1555 Py04_1555 Py04_1574 Py04_1574 Py04_1575 Py04_1575
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppcAPhosphoenolpyruvate carboxylase; Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. Belongs to the PEPCase type 2 family. (464 aa)
Py04_0173Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (816 aa)
Py04_0191methylmalonyl-CoA epimerase; COG0346. (134 aa)
Py04_0199methylmalony-CoA mutase; COG2185. (143 aa)
Py04_0356Aconitate hydratase; COG0538. (836 aa)
Py04_0357Isocitrate dehydrogenase; COG0372. (400 aa)
Py04_0931Pyruvate carboxylase subunit B; COG5016. (468 aa)
Py04_1076Pyruvate ferredoxin oxidoreductase subunit beta; COG1013. (331 aa)
Py04_1077Pyruvate ferredoxin oxidoreductase subunit alpha; COG0674. (396 aa)
Py04_1078Pyuvate ferredoxin oxidoreductase subunit delta; COG1144. (105 aa)
Py04_1082Pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; COG1014. (185 aa)
Py04_1084acetyl-CoA acetyltransferase; COG0183. (388 aa)
Py04_1276methylmalonyl-CoA mutase, subunit alpha; COG1884. (562 aa)
Py04_15492-oxoglutarate ferredoxin oxidoreductase subunit gamma; COG1014. (180 aa)
Py04_15502-oxoglutarate ferredoxin oxidoreductase subunit beta; COG1013. (281 aa)
Py04_15512-oxoglutarate ferredoxin oxidoreductase subunit alpha; COG0674. (385 aa)
Py04_15522-oxoglutarate ferredoxin oxidoreductase subunit gamma; COG1014. (170 aa)
Py04_15532-oxoglutarate ferredoxin oxidoreductase subunit beta; COG1013. (280 aa)
Py04_15542-oxoglutarate ferredoxin oxidoreductase subunit alpha; COG0674. (397 aa)
Py04_15552-oxoglutarate ferredoxin oxidoreductase, subunit delta; COG1146. (89 aa)
Py04_1574Fumarate hydratase (fumarase) alpha subunit; COG1951. (276 aa)
Py04_1575Fumarate hydratase (fumarase) beta subunit; COG1838. (166 aa)
Your Current Organism:
Pyrococcus sp. ST04
NCBI taxonomy Id: 1183377
Other names: P. sp. ST04
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