STRINGSTRING
dadA1 dadA1 hisC1 hisC1 melA1 melA1 pheC pheC vllY vllY aatB1 aatB1 dat dat aatA aatA tyrC tyrC hisC2 hisC2 hmgA hmgA hpd hpd hisC3 hisC3 aatB2 aatB2 pheA pheA tatA2 tatA2 yhhY yhhY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dadA1D-amino acid dehydrogenase small subunit DadA; Oxidative deamination of D-amino acids. (415 aa)
hisC1Histidinol-phosphate aminotransferase. (373 aa)
melA1Protein MelA. (629 aa)
pheCCyclohexadienyl dehydratase PheC. (256 aa)
vllYHemolysin VllY. (629 aa)
aatB1Aspartate aminotransferase B. (403 aa)
datD-alanine aminotransferase Dat. (287 aa)
aatAAspartate aminotransferase A. (456 aa)
tyrCProtein TyrC. (308 aa)
hisC2Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (368 aa)
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (453 aa)
hpd4-hydroxyphenylpyruvate dioxygenase Hpd. (372 aa)
hisC3Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (351 aa)
aatB2Aspartate aminotransferase B. (410 aa)
pheAP-protein PheA. (316 aa)
tatA2Tyrosine aminotransferase TatA. (389 aa)
yhhYPutative N-acetyltransferase YhhY. (167 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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