STRINGSTRING
thcD1 thcD1 AFL49844.1 AFL49844.1 AFL49845.1 AFL49845.1 thcD2 thcD2 fdxB1 fdxB1 cyp104 cyp104 nahR1 nahR1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
thcD1Rhodocoxin reductase ThcD. (405 aa)
AFL49844.1Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component. (408 aa)
AFL49845.1Putative rieske-like ferredoxin MocE. (105 aa)
thcD2Rhodocoxin reductase ThcD. (396 aa)
fdxB12Fe-2S ferredoxin. (106 aa)
cyp104Cytochrome P450-pinF2, plant-inducible. (393 aa)
nahR1HTH-type transcriptional activator NahR; Belongs to the LysR transcriptional regulatory family. (307 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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