STRINGSTRING
exoB1 exoB1 kpsS kpsS rkpI rkpI ctrA1 ctrA1 rfbD rfbD AFL48994.1 AFL48994.1 AFL49018.1 AFL49018.1 rkpK rkpK lspL lspL AFL49650.1 AFL49650.1 AFL49651.1 AFL49651.1 AFL49652.1 AFL49652.1 hepA hepA fcl fcl noeL noeL AFL49664.1 AFL49664.1 AFL49665.1 AFL49665.1 rfbC rfbC AFL49667.1 AFL49667.1 AFL49668.1 AFL49668.1 gmhB gmhB gmhA gmhA wecG wecG wzx wzx AFL49678.1 AFL49678.1 AFL49679.1 AFL49679.1 AFL49680.1 AFL49680.1 AFL49687.1 AFL49687.1 wcaJ1 wcaJ1 algC algC algA algA AFL49789.1 AFL49789.1 AFL49819.1 AFL49819.1 exsH exsH AFL49963.1 AFL49963.1 AFL49964.1 AFL49964.1 exoB3 exoB3 exoZ exoZ exoQ exoQ exoF1 exoF1 exoY exoY exoU1 exoU1 exoK exoK exoL exoL exoA exoA exoM exoM exoO exoO exoN1 exoN1 exoP1 exoP1 AFL50015.1 AFL50015.1 lipA1 lipA1 AFL50039.1 AFL50039.1 AFL50040.1 AFL50040.1 AFL50041.1 AFL50041.1 AFL50042.1 AFL50042.1 AFL50043.1 AFL50043.1 AFL50044.1 AFL50044.1 AFL50045.1 AFL50045.1 exoP2 exoP2 AFL50047.1 AFL50047.1 AFL50048.1 AFL50048.1 prmC prmC AFL50050.1 AFL50050.1 AFL50129.1 AFL50129.1 AFL50130.1 AFL50130.1 AFL50135.1 AFL50135.1 AFL50136.1 AFL50136.1 AFL50187.1 AFL50187.1 wcaL wcaL AFL50189.1 AFL50189.1 wcaK wcaK AFL50249.1 AFL50249.1 wzxC wzxC AFL50276.1 AFL50276.1 exoU2 exoU2 AFL50537.1 AFL50537.1 AFL50566.1 AFL50566.1 AFL50567.1 AFL50567.1 AFL50569.1 AFL50569.1 AFL50677.1 AFL50677.1 AFL50764.1 AFL50764.1 AFL51091.1 AFL51091.1 AFL51233.1 AFL51233.1 kpsM1 kpsM1 lpsZ1 lpsZ1 AFL51444.1 AFL51444.1 AFL51445.1 AFL51445.1 noeK noeK noeJ noeJ kpsE kpsE kpsT kpsT kpsM2 kpsM2 lpsZ2 lpsZ2 AFL51453.1 AFL51453.1 AFL51763.1 AFL51763.1 AFL51766.1 AFL51766.1 wbpT wbpT AFL51780.1 AFL51780.1 epsC epsC AFL51783.1 AFL51783.1 AFL51784.1 AFL51784.1 AFL51785.1 AFL51785.1 fmt2 fmt2 AFL51790.1 AFL51790.1 AFL51791.1 AFL51791.1 lpcC lpcC AFL51794.1 AFL51794.1 AFL51795.1 AFL51795.1 AFL51796.1 AFL51796.1 AFL51797.1 AFL51797.1 yghQ yghQ exoF2 exoF2 epsL epsL AFL51801.1 AFL51801.1 spsC spsC AFL51804.1 AFL51804.1 AFL51829.1 AFL51829.1 wcaJ2 wcaJ2 AFL51831.1 AFL51831.1 AFL51832.1 AFL51832.1 AFL51833.1 AFL51833.1 AFL52376.1 AFL52376.1 AFL52462.1 AFL52462.1 AFL52486.1 AFL52486.1 lpsB lpsB AFL52647.1 AFL52647.1 AFL52832.1 AFL52832.1 AFL53394.1 AFL53394.1 AFL53395.1 AFL53395.1 AFL53396.1 AFL53396.1 ygaK ygaK AFL53398.1 AFL53398.1 rfbF rfbF rfbG rfbG AFL53401.1 AFL53401.1 AFL53402.1 AFL53402.1 AFL53403.1 AFL53403.1 AFL53404.1 AFL53404.1 ytcB ytcB AFL53701.1 AFL53701.1 AFL53732.1 AFL53732.1 sqdB sqdB sqdD sqdD AFL53735.1 AFL53735.1 exoN2 exoN2 bfr bfr AFL54201.1 AFL54201.1 AFL54702.1 AFL54702.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
exoB1UDP-glucose 4-epimerase ExoB; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (344 aa)
kpsSCapsule polysaccharide export protein KpsS. (443 aa)
rkpICapsular polysaccharide biosynthesis protein RkpI. (531 aa)
ctrA1Capsule polysaccharide export outer membrane protein CtrA. (395 aa)
rfbDPutative UDP-galactopyranose mutase RfbD. (385 aa)
AFL48994.1Hypothetical protein. (54 aa)
AFL49018.1UPF0337 protein RB0906; Belongs to the UPF0337 (CsbD) family. (67 aa)
rkpKUDP-glucose 6-dehydrogenase RkpK. (437 aa)
lspLUDP-glucuronate 5'-epimerase LspL. (341 aa)
AFL49650.1O-antigen five: acetylation of the O-antigen. (396 aa)
AFL49651.1Putative glycosyltransferase. (376 aa)
AFL49652.1Putative glycosyl transferase. (346 aa)
hepAHeterocyst differentiation ATP-binding protein HepA. (598 aa)
fclUncharacterized protein y4aF; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (322 aa)
noeLGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (356 aa)
AFL49664.1Hypothetical protein. (262 aa)
AFL49665.1Hypothetical protein. (445 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
AFL49667.1GHMP kinase. (361 aa)
AFL49668.1NAD-dependent epimerase/dehydratase. (351 aa)
gmhBD,D-heptose 1,7-bisphosphate phosphatase. (422 aa)
gmhAPhosphoheptose isomerase GmhA. (205 aa)
wecGPutative UDP-N-acetyl-D-mannosaminuronic acid transferase WecG; Belongs to the glycosyltransferase 26 family. (304 aa)
wzxWzx. (438 aa)
AFL49678.1Hypothetical protein. (593 aa)
AFL49679.1Hypothetical protein. (417 aa)
AFL49680.1Polysaccharide export protein. (420 aa)
AFL49687.1Hypothetical protein. (386 aa)
wcaJ1Putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ. (482 aa)
algCPhosphomannomutase/phosphoglucomutase AlgC. (516 aa)
algAAlginate biosynthesis protein AlgA. (769 aa)
AFL49789.1Hypothetical protein. (57 aa)
AFL49819.1Putative UDP-glucose 4-epimerase protein. (326 aa)
exsHEndo-1,3-1,4-beta-glycanase ExsH. (465 aa)
AFL49963.1Glycosyl transferase family 39. (533 aa)
AFL49964.1Putative multidrug export ATP-binding/permease protein. (650 aa)
exoB3UDP-glucose 4-epimerase ExoB; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (326 aa)
exoZExopolysaccharide production protein ExoZ. (335 aa)
exoQExopolysaccharide production protein ExoQ. (426 aa)
exoF1Exopolysaccharide production protein ExoF. (421 aa)
exoYExopolysaccharide production protein ExoY. (278 aa)
exoU1Succinoglycan biosynthesis protein ExoU. (341 aa)
exoKEndo-1,3-1,4-beta-glycanase ExoK. (315 aa)
exoLSuccinoglycan biosynthesis protein ExoL. (403 aa)
exoASuccinoglycan biosynthesis protein ExoA. (331 aa)
exoMSuccinoglycan biosynthesis protein ExoM. (307 aa)
exoOSuccinoglycan biosynthesis protein ExoO. (344 aa)
exoN1UTP--glucose-1-phosphate uridylyltransferase ExoN. (301 aa)
exoP1Succinoglycan biosynthesis transport protein ExoP. (788 aa)
AFL50015.1Hypothetical protein. (62 aa)
lipA1Capsule polysaccharide modification protein LipA. (340 aa)
AFL50039.1Hypothetical protein. (724 aa)
AFL50040.1Hypothetical protein. (332 aa)
AFL50041.1Hypothetical protein. (149 aa)
AFL50042.1Putative glycosyltransferase. (449 aa)
AFL50043.1Putative polysaccharide biosynthesis protein. (413 aa)
AFL50044.1Polysaccharide deacetylase. (251 aa)
AFL50045.1Exopolysaccharide production protein. (443 aa)
exoP2Succinoglycan biosynthesis transport protein ExoP. (549 aa)
AFL50047.1Hypothetical protein. (381 aa)
AFL50048.1Polysaccharide biosynthesis protein. (448 aa)
prmCRelease factor glutamine methyltransferase PrmC. (241 aa)
AFL50050.1Hypothetical protein. (372 aa)
AFL50129.1Hypothetical protein. (331 aa)
AFL50130.1Sulfatase modifying factor 2. (281 aa)
AFL50135.1Putative glycosyltransferase. (354 aa)
AFL50136.1Hypothetical protein. (39 aa)
AFL50187.1Hypothetical protein. (361 aa)
wcaLPutative colanic acid biosynthesis glycosyltransferase WcaL. (393 aa)
AFL50189.1Putative succinoglycan transport protein. (487 aa)
wcaKColanic acid biosynthesis protein WcaK. (447 aa)
AFL50249.1UPF0337 protein; Belongs to the UPF0337 (CsbD) family. (71 aa)
wzxCLipopolysaccharide biosynthesis protein WzxC. (498 aa)
AFL50276.1Hypothetical protein. (98 aa)
exoU2Succinoglycan biosynthesis protein ExoU. (334 aa)
AFL50537.1UPF0337 protein; Belongs to the UPF0337 (CsbD) family. (68 aa)
AFL50566.1Hypothetical protein. (104 aa)
AFL50567.1Hypothetical protein. (201 aa)
AFL50569.1Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (63 aa)
AFL50677.1Putative nucleotidyltransferase protein. (303 aa)
AFL50764.1Hypothetical protein. (69 aa)
AFL51091.1Hypothetical protein; Belongs to the DapA family. (319 aa)
AFL51233.1Hypothetical protein. (717 aa)
kpsM1Polysialic acid transport protein KpsM. (258 aa)
lpsZ1Lipopolysaccharide-processing protein LpsZ. (362 aa)
AFL51444.1cps10D: Cps10D. (588 aa)
AFL51445.1cps10C: Cps10C. (510 aa)
noeKPhosphomannomutase NoeK. (483 aa)
noeJMannose-1-phosphate guanylyltransferase NoeJ; Belongs to the mannose-6-phosphate isomerase type 2 family. (475 aa)
kpsECapsule polysaccharide export inner-membrane protein KpsE. (446 aa)
kpsTPolysialic acid transport ATP-binding protein KpsT. (219 aa)
kpsM2Polysialic acid transport protein KpsM. (256 aa)
lpsZ2Lipopolysaccharide-processing protein LpsZ. (461 aa)
AFL51453.1Putative nucleotidyltransferase protein. (351 aa)
AFL51763.1Nucleoside-diphosphate-sugar epimerase. (328 aa)
AFL51766.1UPF0337 protein. (68 aa)
wbpTLipopolysaccharide biosynthesis protein WbpT. (384 aa)
AFL51780.1Putative glycosyl transferase. (407 aa)
epsCPutative polysaccharide biosynthesis protein EpsC. (731 aa)
AFL51783.1Uncharacterized protein. (610 aa)
AFL51784.1Hypothetical protein. (49 aa)
AFL51785.1Hypothetical protein. (143 aa)
fmt2methionyl-tRNA formyltransferase Fmt. (304 aa)
AFL51790.1Hypothetical protein. (50 aa)
AFL51791.1Putative MPA1 family protein. (611 aa)
lpcCLipopolysaccharide core biosynthesis mannosyltransferase LpcC. (401 aa)
AFL51794.1Putative sulfotransferase, C-terminal domain protein. (308 aa)
AFL51795.1Hypothetical protein. (493 aa)
AFL51796.1Putative ATPGTP-binding protein. (297 aa)
AFL51797.1Heparan sulfate glucosamine 3-O-sulfotransferase 3B1. (278 aa)
yghQInner membrane protein YghQ. (445 aa)
exoF2Exopolysaccharide production protein ExoF. (417 aa)
epsLPutative sugar transferase EpsL. (229 aa)
AFL51801.1Hypothetical protein. (228 aa)
spsCSpore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family. (405 aa)
AFL51804.1Putative glycosyltransferase. (392 aa)
AFL51829.1Putative transmembrane protein. (416 aa)
wcaJ2Putative colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ. (520 aa)
AFL51831.1Glycosyl transferase. (398 aa)
AFL51832.1Polysaccharide export-like protein. (191 aa)
AFL51833.1Putative transmembrane succinoglycan biosynthesis transport protein. (710 aa)
AFL52376.1UPF0700 transmembrane protein. (225 aa)
AFL52462.1NAD-dependent epimerase/dehydratase. (154 aa)
AFL52486.1UPF0700 transmembrane protein. (225 aa)
lpsBLipopolysaccharide core biosynthesis mannosyltransferase LpsB. (351 aa)
AFL52647.1Hypothetical protein. (92 aa)
AFL52832.1Hypothetical protein. (106 aa)
AFL53394.1Hypothetical protein. (125 aa)
AFL53395.1Hypothetical protein. (132 aa)
AFL53396.1L-2,4-diaminobutyrate decarboxylase. (480 aa)
ygaKPutative FAD-linked oxidoreductase YgaK. (479 aa)
AFL53398.1Hypothetical protein. (59 aa)
rfbFGlucose-1-phosphate cytidylyltransferase RfbF. (257 aa)
rfbGCDP-glucose 4,6-dehydratase. (356 aa)
AFL53401.1Putative SAM-dependent methyltransferase. (410 aa)
AFL53402.1Cephalosporin hydroxylase. (260 aa)
AFL53403.1Hypothetical protein. (276 aa)
AFL53404.1Putative acetyltransferase protein. (262 aa)
ytcBPutative UDP-glucose epimerase YtcB. (346 aa)
AFL53701.1Hypothetical protein. (93 aa)
AFL53732.1Putative 4-hydroxybenzoyl-CoA thioesterase protein. (151 aa)
sqdBUDP-sulfoquinovose synthase SqdB. (406 aa)
sqdDGlycosyl transferase SqdD. (292 aa)
AFL53735.1UDP-glucose 4-epimerase. (297 aa)
exoN2UTP--glucose-1-phosphate uridylyltransferase ExoN. (295 aa)
bfrBacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (161 aa)
AFL54201.1Hypothetical protein. (103 aa)
AFL54702.1NAD-dependent epimerase/dehydratase. (346 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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