STRINGSTRING
kpsS kpsS rkpI rkpI lipA1 lipA1 kpsM1 kpsM1 lpsZ1 lpsZ1 kpsE kpsE kpsT kpsT kpsM2 kpsM2 lpsZ2 lpsZ2 AFL51453.1 AFL51453.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kpsSCapsule polysaccharide export protein KpsS. (443 aa)
rkpICapsular polysaccharide biosynthesis protein RkpI. (531 aa)
lipA1Capsule polysaccharide modification protein LipA. (340 aa)
kpsM1Polysialic acid transport protein KpsM. (258 aa)
lpsZ1Lipopolysaccharide-processing protein LpsZ. (362 aa)
kpsECapsule polysaccharide export inner-membrane protein KpsE. (446 aa)
kpsTPolysialic acid transport ATP-binding protein KpsT. (219 aa)
kpsM2Polysialic acid transport protein KpsM. (256 aa)
lpsZ2Lipopolysaccharide-processing protein LpsZ. (461 aa)
AFL51453.1Putative nucleotidyltransferase protein. (351 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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