STRINGSTRING
bepE bepE bepF1 bepF1 AFL50029.1 AFL50029.1 AFL50030.1 AFL50030.1 ttgB ttgB mdtC1 mdtC1 AFL50603.1 AFL50603.1 AFL50604.1 AFL50604.1 AFL50605.1 AFL50605.1 AFL50950.1 AFL50950.1 AFL50951.1 AFL50951.1 AFL50952.1 AFL50952.1 AFL50953.1 AFL50953.1 lolD1 lolD1 lolC1 lolC1 AFL51250.1 AFL51250.1 cusA cusA cusB cusB AFL51289.1 AFL51289.1 AFL51290.1 AFL51290.1 lolC2 lolC2 lolD2 lolD2 amiC2 amiC2 bepC bepC AFL52503.1 AFL52503.1 AFL52504.1 AFL52504.1 AFL52505.1 AFL52505.1 macA macA macB macB AFL53003.1 AFL53003.1 mdtA mdtA AFL53005.1 AFL53005.1 AFL53006.1 AFL53006.1 AFL53456.1 AFL53456.1 nolG nolG AFL53458.1 AFL53458.1 bepG bepG bepF2 bepF2 AFL54293.1 AFL54293.1 acrF acrF ttgA ttgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bepEEfflux pump membrane transporter BepE. (1061 aa)
bepF1Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (400 aa)
AFL50029.1Putative transcriptional regulator protein, TetR family. (202 aa)
AFL50030.1Putative multidrug efflux transporter protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (379 aa)
ttgBPutative efflux pump membrane transporter TtgB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1050 aa)
mdtC1Multidrug resistance protein MdtC. (143 aa)
AFL50603.1HlyD-family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (500 aa)
AFL50604.1Cation/multidrug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (983 aa)
AFL50605.1Transcriptional regulator, TetR family. (217 aa)
AFL50950.1Hypothetical protein. (44 aa)
AFL50951.1Putative ABC transporter ATP-binding protein. (217 aa)
AFL50952.1Putative transmembrane FtsX-family attachment transporter-like protein. (803 aa)
AFL50953.1Secreted hydrolase-like protein. (357 aa)
lolD1Lipoprotein-releasing system ATP-binding protein LolD. (223 aa)
lolC1Lipoprotein-releasing system transmembrane protein LolC. (413 aa)
AFL51250.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (335 aa)
cusACation efflux system protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1055 aa)
cusBCation efflux system protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (476 aa)
AFL51289.1Hypothetical protein. (132 aa)
AFL51290.1Hypothetical protein. (133 aa)
lolC2Lipoprotein-releasing system transmembrane protein LolC. (436 aa)
lolD2Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (228 aa)
amiC2N-acetylmuramoyl-L-alanine amidase AmiC. (420 aa)
bepCOuter membrane efflux protein BepC. (455 aa)
AFL52503.1Membrane protein. (399 aa)
AFL52504.1Putative permease. (787 aa)
AFL52505.1Putative ABC transporter ATP-binding protein. (239 aa)
macAPutative macrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (422 aa)
macBMacrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (647 aa)
AFL53003.1Putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1046 aa)
mdtAMultidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (397 aa)
AFL53005.1Putative transmembrane protein. (270 aa)
AFL53006.1Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (136 aa)
AFL53456.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (395 aa)
nolGNodulation protein NolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1101 aa)
AFL53458.1Hypothetical protein. (48 aa)
bepGEfflux pump membrane transporter BepG. (1058 aa)
bepF2Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (385 aa)
AFL54293.1Putative outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (221 aa)
acrFAcriflavine resistance protein F. (1048 aa)
ttgAToluene efflux pump periplasmic linker protein TtgA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (405 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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