STRINGSTRING
bepE bepE bepF1 bepF1 mdtC1 mdtC1 AFL51250.1 AFL51250.1 bepC bepC macA macA macB macB bepG bepG bepF2 bepF2 acrF acrF ttgA ttgA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bepEEfflux pump membrane transporter BepE. (1061 aa)
bepF1Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (400 aa)
mdtC1Multidrug resistance protein MdtC. (143 aa)
AFL51250.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (335 aa)
bepCOuter membrane efflux protein BepC. (455 aa)
macAPutative macrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (422 aa)
macBMacrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (647 aa)
bepGEfflux pump membrane transporter BepG. (1058 aa)
bepF2Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (385 aa)
acrFAcriflavine resistance protein F. (1048 aa)
ttgAToluene efflux pump periplasmic linker protein TtgA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (405 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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