STRINGSTRING
AFL49247.1 AFL49247.1 prsE1 prsE1 aprD1 aprD1 AFL51383.1 AFL51383.1 AFL51454.1 AFL51454.1 AFL51455.1 AFL51455.1 AFL51458.1 AFL51458.1 prsD prsD prsE2 prsE2 AFL51778.1 AFL51778.1 aprD2 aprD2 prsE3 prsE3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFL49247.1Hypothetical protein. (345 aa)
prsE1Type I secretion system membrane fusion protein PrsE. (525 aa)
aprD1Alkaline protease secretion ATP-binding protein AprD. (595 aa)
AFL51383.1Hemolysin-type calcium-binding region. (334 aa)
AFL51454.1Putative protease. (528 aa)
AFL51455.1Putative protease. (430 aa)
AFL51458.1Hemolysin-type calcium-binding region. (525 aa)
prsDType I secretion system ATP-binding protein PrsD. (586 aa)
prsE2Type I secretion system membrane fusion protein PrsE. (438 aa)
AFL51778.1Putative hemolysin-type calcium-binding region, possible nodulation protein O. (387 aa)
aprD2Alkaline protease secretion ATP-binding protein AprD. (779 aa)
prsE3Type I secretion system membrane fusion protein PrsE. (445 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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