STRINGSTRING
ytfQ ytfQ ytfR ytfR ytfT ytfT yjfF yjfF rbsC3 rbsC3 rbsA3 rbsA3 AFL49820.1 AFL49820.1 gno1 gno1 AFL50070.1 AFL50070.1 rbsB1 rbsB1 rbsC4 rbsC4 mocB1 mocB1 rbsA rbsA mglC mglC rbsA4 rbsA4 rbsC5 rbsC5 AFL50141.1 AFL50141.1 rbsC6 rbsC6 AFL50223.1 AFL50223.1 rbsA5 rbsA5 AFL50225.1 AFL50225.1 AFL50369.1 AFL50369.1 rbsC7 rbsC7 mocB2 mocB2 rbsC8 rbsC8 mocB3 mocB3 gno3 gno3 AFL50448.1 AFL50448.1 rbsB2 rbsB2 rbsC9 rbsC9 AFL50460.1 AFL50460.1 AFL50490.1 AFL50490.1 AFL50491.1 AFL50491.1 rbsC11 rbsC11 AFL50844.1 AFL50844.1 AFL50845.1 AFL50845.1 AFL50846.1 AFL50846.1 AFL50847.1 AFL50847.1 cytR3 cytR3 AFL50849.1 AFL50849.1 fabG7 fabG7 AFL51056.1 AFL51056.1 AFL51057.1 AFL51057.1 rbsC15 rbsC15 AFL51059.1 AFL51059.1 AFL51719.1 AFL51719.1 rbsA9 rbsA9 AFL51721.1 AFL51721.1 rbsC16 rbsC16 AFL51723.1 AFL51723.1 xylH1 xylH1 araG araG chvE chvE AFL53316.1 AFL53316.1 xylF xylF xylH2 xylH2 rbsA10 rbsA10 AFL54389.1 AFL54389.1 rbsA12 rbsA12 rbsC18 rbsC18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ytfQABC transporter periplasmic-binding protein YtfQ. (320 aa)
ytfRPutative ABC transporter ATP-binding protein YtfR. (528 aa)
ytfTInner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
yjfFInner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
rbsC3Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
rbsA3Ribose import ATP-binding protein RbsA. (246 aa)
AFL49820.1Periplasmic sugar-binding protein of sugar ABC transporter. (329 aa)
gno1Gluconate 5-dehydrogenase Gno. (262 aa)
AFL50070.1Putative ribose/galactose/methyl galactoside import ATP-binding protein 1. (495 aa)
rbsB1D-ribose-binding protein RbsB. (312 aa)
rbsC4Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
mocB1Putative rhizopine-binding protein MocB. (309 aa)
rbsAPutative ribose/galactose/methyl galactoside import ATP-binding protein 2; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (513 aa)
mglCGalactoside transport system permease protein MglC. (341 aa)
rbsA4Ribose import ATP-binding protein RbsA. (277 aa)
rbsC5Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (756 aa)
AFL50141.1Hypothetical protein. (360 aa)
rbsC6Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
AFL50223.1Putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
rbsA5Ribose import ATP-binding protein RbsA. (517 aa)
AFL50225.1Binding protein component of ABC ribose transporter. (374 aa)
AFL50369.1Putative ribose/galactose/methyl galactoside import ATP-binding protein 2. (463 aa)
rbsC7Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (218 aa)
mocB2Putative rhizopine-binding protein MocB. (328 aa)
rbsC8Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
mocB3Putative rhizopine-binding protein MocB. (328 aa)
gno3Gluconate 5-dehydrogenase Gno. (262 aa)
AFL50448.1Putative ribose/galactose/methyl galactoside import ATP-binding protein 1. (495 aa)
rbsB2D-ribose-binding protein RbsB. (310 aa)
rbsC9Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
AFL50460.1Putative ribose/galactose/methyl galactoside import ATP-binding protein 3. (503 aa)
AFL50490.1ABC transporter, periplasmic sugar binding protein. (315 aa)
AFL50491.1Putative ribose/galactose/methyl galactoside import ATP-binding protein. (497 aa)
rbsC11Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (329 aa)
AFL50844.1Ribose ABC transporter, ribose-binding protein. (341 aa)
AFL50845.1Putative ribose/galactose/methyl galactoside import ATP-binding protein. (501 aa)
AFL50846.1Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
AFL50847.1Ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
cytR3HTH-type transcriptional repressor CytR. (339 aa)
AFL50849.1Putative dehydrogenase. (414 aa)
fabG7Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)
AFL51056.1Putative sugar ABC transporter, substrate-binding component. (350 aa)
AFL51057.1Putative ribose/galactose/methyl galactoside import ATP-binding protein. (526 aa)
rbsC15Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
AFL51059.1Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
AFL51719.1Putative periplasmic binding protein, putative substrate ribose. (330 aa)
rbsA9Ribose import ATP-binding protein RbsA. (572 aa)
AFL51721.1Putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
rbsC16Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
AFL51723.1Uncharacterized protein. (311 aa)
xylH1Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (404 aa)
araGL-arabinose transport ATP-binding protein AraG. (511 aa)
chvEMultiple sugar-binding periplasmic receptor ChvE. (355 aa)
AFL53316.1Putative xylose operon repressor, ROK familiy protein. (403 aa)
xylFD-xylose-binding periplasmic protein XylF. (345 aa)
xylH2Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (449 aa)
rbsA10Ribose import ATP-binding protein RbsA. (261 aa)
AFL54389.1Periplasmic binding protein/LacI transcriptional regulator. (329 aa)
rbsA12Ribose import ATP-binding protein RbsA. (513 aa)
rbsC18Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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