STRINGSTRING
ytfQ ytfQ ytfR ytfR ytfT ytfT yjfF yjfF xylH1 xylH1 araG araG chvE chvE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ytfQABC transporter periplasmic-binding protein YtfQ. (320 aa)
ytfRPutative ABC transporter ATP-binding protein YtfR. (528 aa)
ytfTInner membrane ABC transporter permease protein YtfT; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
yjfFInner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
xylH1Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (404 aa)
araGL-arabinose transport ATP-binding protein AraG. (511 aa)
chvEMultiple sugar-binding periplasmic receptor ChvE. (355 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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