STRINGSTRING
pucG pucG ocd ocd arcB1 arcB1 gcl gcl ocd2 ocd2 AFL50358.1 AFL50358.1 sgaA1 sgaA1 sgaA2 sgaA2 ocd1 ocd1 AFL51742.1 AFL51742.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pucGPurine catabolism protein PucG. (370 aa)
ocdOrnithine cyclodeaminase. (330 aa)
arcB1Ornithine cyclodeaminase ArcB. (349 aa)
gclGlyoxylate carboligase Gcl; Belongs to the TPP enzyme family. (594 aa)
ocd2Ornithine cyclodeaminase 2. (293 aa)
AFL50358.1D-threonine aldolase. (387 aa)
sgaA1Serine--glyoxylate aminotransferase SgaA. (396 aa)
sgaA2Serine--glyoxylate aminotransferase SgaA. (396 aa)
ocd1Ornithine cyclodeaminase 1. (329 aa)
AFL51742.1D-threonine aldolase. (352 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.