STRINGSTRING
gsiA6 gsiA6 oppD3 oppD3 bacA bacA oppD4 oppD4 appF2 appF2 gsiA7 gsiA7 yejF3 yejF3 dppD dppD dppF1 dppF1 yejF1 yejF1 gsiA2 gsiA2 oppD1 oppD1 appF1 appF1 yejF2 yejF2 ykfD1 ykfD1 oppD2 oppD2 AFL51481.1 AFL51481.1 gsiA3 gsiA3 gsiA4 gsiA4 gsiA5 gsiA5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gsiA6Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (543 aa)
oppD3Oligopeptide transport ATP-binding protein OppD. (277 aa)
bacABacteroid development protein BacA. (475 aa)
oppD4Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (337 aa)
appF2Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily. (331 aa)
gsiA7Glutathione import ATP-binding protein GsiA. (473 aa)
yejF3Putative ABC transporter ATP-binding protein YejF; Belongs to the ABC transporter superfamily. (542 aa)
dppDDipeptide transport ATP-binding protein DppD. (284 aa)
dppF1Dipeptide transport ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (275 aa)
yejF1Putative ABC transporter ATP-binding protein YejF; Belongs to the ABC transporter superfamily. (542 aa)
gsiA2Glutathione import ATP-binding protein GsiA. (283 aa)
oppD1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (335 aa)
appF1Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily. (327 aa)
yejF2Putative ABC transporter ATP-binding protein YejF; Belongs to the ABC transporter superfamily. (556 aa)
ykfD1Putative oligopeptide transport ATP-binding protein YkfD; Belongs to the ABC transporter superfamily. (329 aa)
oppD2Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (323 aa)
AFL51481.1Hypothetical protein. (67 aa)
gsiA3Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (573 aa)
gsiA4Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (552 aa)
gsiA5Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (630 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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