STRINGSTRING
AFL51461.1 AFL51461.1 AFL51440.1 AFL51440.1 AFL52034.1 AFL52034.1 secDF1 secDF1 AFL51434.1 AFL51434.1 AFL51433.1 AFL51433.1 AFL51432.1 AFL51432.1 AFL51429.1 AFL51429.1 tatC tatC AFL51428.1 AFL51428.1 AFL51426.1 AFL51426.1 AFL51425.1 AFL51425.1 AFL51424.1 AFL51424.1 tatB tatB tatA1 tatA1 AFL51423.1 AFL51423.1 AFL51419.1 AFL51419.1 AFL51411.1 AFL51411.1 yscN yscN AFL50742.1 AFL50742.1 nolW nolW AFL50329.1 AFL50329.1 aprD1 aprD1 fliI fliI AFL52535.1 AFL52535.1 AFL52865.1 AFL52865.1 secA secA aprD2 aprD2 secDF2 secDF2 secY secY prsD prsD virD4 virD4 AFL51506.1 AFL51506.1 virB8 virB8 virB10 virB10 virB6 virB6 virB4 virB4 virB3 virB3 AFL51482.1 AFL51482.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFL51461.1YecA family protein. (170 aa)
AFL51440.1Hypothetical protein. (821 aa)
AFL52034.1Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (168 aa)
secDF1Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (844 aa)
AFL51434.1Hypothetical protein. (382 aa)
AFL51433.1Hypothetical protein. (178 aa)
AFL51432.1Hypothetical protein. (502 aa)
AFL51429.1Hypothetical protein. (624 aa)
tatCSec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (280 aa)
AFL51428.1Hypothetical protein. (355 aa)
AFL51426.1Hypothetical protein. (152 aa)
AFL51425.1Hypothetical protein. (444 aa)
AFL51424.1Putative conserved membrane protein. (439 aa)
tatBSec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (237 aa)
tatA1Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (68 aa)
AFL51423.1Hypothetical protein. (1176 aa)
AFL51419.1Hypothetical protein. (324 aa)
AFL51411.1YecA family protein. (187 aa)
yscNPutative ATP synthase YscN. (448 aa)
AFL50742.1Putative type III secretion component, YOP proteins translocation protein L. (201 aa)
nolWNodulation protein NolW. (206 aa)
AFL50329.1Uncharacterized protein y4hQ. (194 aa)
aprD1Alkaline protease secretion ATP-binding protein AprD. (595 aa)
fliIFlagellum-specific ATP synthase FliI. (466 aa)
AFL52535.1Putative MarC family transmembrane protein. (209 aa)
AFL52865.1Hypothetical protein. (249 aa)
secAProtein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (901 aa)
aprD2Alkaline protease secretion ATP-binding protein AprD. (779 aa)
secDF2Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (855 aa)
secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (446 aa)
prsDType I secretion system ATP-binding protein PrsD. (586 aa)
virD4Type IV secretion system-coupling protein VirD4. (636 aa)
AFL51506.1Uncharacterized protein y4hQ. (229 aa)
virB8Type IV secretion system protein VirB8. (223 aa)
virB10Type IV secretion system protein VirB10. (390 aa)
virB6Type IV secretion system protein VirB6. (310 aa)
virB4Type IV secretion system protein VirB4. (793 aa)
virB3Type IV secretion system protein VirB3. (113 aa)
AFL51482.1Hypothetical protein. (87 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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