Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| benC | hcr1 | USDA257_c54430 | USDA257_c05860 | Benzoate 1,2-dioxygenase electron transfer component. | NADH oxidoreductase Hcr. | 0.596 |
| benC | hcr2 | USDA257_c54430 | USDA257_c26160 | Benzoate 1,2-dioxygenase electron transfer component. | NADH oxidoreductase Hcr. | 0.610 |
| benC | nuoG1 | USDA257_c54430 | USDA257_c33050 | Benzoate 1,2-dioxygenase electron transfer component. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.515 |
| benC | paaE | USDA257_c54430 | USDA257_c50050 | Benzoate 1,2-dioxygenase electron transfer component. | Putative phenylacetic acid degradation NADH oxidoreductase PaaE. | 0.569 |
| fdxB1 | nuoG1 | USDA257_c26490 | USDA257_c33050 | 2Fe-2S ferredoxin. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.515 |
| fdxB2 | nuoG1 | USDA257_c40890 | USDA257_c33050 | 2Fe-2S ferredoxin. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.515 |
| hcr1 | benC | USDA257_c05860 | USDA257_c54430 | NADH oxidoreductase Hcr. | Benzoate 1,2-dioxygenase electron transfer component. | 0.596 |
| hcr1 | nuoG1 | USDA257_c05860 | USDA257_c33050 | NADH oxidoreductase Hcr. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.515 |
| hcr2 | benC | USDA257_c26160 | USDA257_c54430 | NADH oxidoreductase Hcr. | Benzoate 1,2-dioxygenase electron transfer component. | 0.610 |
| hcr2 | nuoG1 | USDA257_c26160 | USDA257_c33050 | NADH oxidoreductase Hcr. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.515 |
| hcrC | xdhB | USDA257_c47480 | USDA257_c09800 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Xanthine dehydrogenase FAD-binding subunit XdhB. | 0.902 |
| hcrC | yagT1 | USDA257_c47480 | USDA257_c22480 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit YagT. | 0.919 |
| hcrC | yagT2 | USDA257_c47480 | USDA257_c51610 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit YagT. | 0.919 |
| iorA2 | yagT2 | USDA257_c51590 | USDA257_c51610 | Isoquinoline 1-oxidoreductase subunit alpha. | Putative xanthine dehydrogenase yagT iron-sulfur-binding subunit YagT. | 0.498 |
| nuoG1 | benC | USDA257_c33050 | USDA257_c54430 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | Benzoate 1,2-dioxygenase electron transfer component. | 0.515 |
| nuoG1 | fdxB1 | USDA257_c33050 | USDA257_c26490 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 2Fe-2S ferredoxin. | 0.515 |
| nuoG1 | fdxB2 | USDA257_c33050 | USDA257_c40890 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 2Fe-2S ferredoxin. | 0.515 |
| nuoG1 | hcr1 | USDA257_c33050 | USDA257_c05860 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | NADH oxidoreductase Hcr. | 0.515 |
| nuoG1 | hcr2 | USDA257_c33050 | USDA257_c26160 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | NADH oxidoreductase Hcr. | 0.515 |
| nuoG1 | nuoG2 | USDA257_c33050 | USDA257_c45960 | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. | 0.934 |
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