STRINGSTRING
putA putA ocd ocd gabD1 gabD1 puuA puuA nadB nadB purF purF gabD2 gabD2 puuE1 puuE1 asnB1 asnB1 gln gln gabD4 gabD4 sgaA1 sgaA1 pucG pucG sgaA2 sgaA2 aatB1 aatB1 aspA aspA ansA ansA gabD5 gabD5 asnB2 asnB2 AFL51762.1 AFL51762.1 pyrB pyrB glmS1 glmS1 glnA1 glnA1 ald ald purB purB carB carB purQ purQ ygeA ygeA glnA2 glnA2 carA carA aatA aatA argH argH purA purA gltB1 gltB1 gltB2 gltB2 argG argG aatB2 aatB2 gdhB gdhB gabD8 gabD8 AFL54444.1 AFL54444.1 glmS2 glmS2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
putABifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1311 aa)
ocdOrnithine cyclodeaminase. (330 aa)
gabD1Succinate-semialdehyde dehydrogenase [NADP+] GabD; Belongs to the aldehyde dehydrogenase family. (498 aa)
puuAGamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (478 aa)
nadBL-aspartate oxidase NadB; Catalyzes the oxidation of L-aspartate to iminoaspartate. (532 aa)
purFAmidophosphoribosyltransferase PurF; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (497 aa)
gabD2Putative succinate-semialdehyde dehydrogenase [NADP+]; Belongs to the aldehyde dehydrogenase family. (491 aa)
puuE14-aminobutyrate aminotransferase PuuE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (422 aa)
asnB1Asparagine synthetase; Glutamine-hydrolyzing. (665 aa)
glnGlutamine synthetase. (344 aa)
gabD4Succinate-semialdehyde dehydrogenase [NADP+] GabD; Belongs to the aldehyde dehydrogenase family. (492 aa)
sgaA1Serine--glyoxylate aminotransferase SgaA. (396 aa)
pucGPurine catabolism protein PucG. (370 aa)
sgaA2Serine--glyoxylate aminotransferase SgaA. (396 aa)
aatB1Aspartate aminotransferase B. (403 aa)
aspAAspartate ammonia-lyase AspA. (467 aa)
ansAL-asparaginase 1. (314 aa)
gabD5Succinate-semialdehyde dehydrogenase [NADP+] GabD; Belongs to the aldehyde dehydrogenase family. (485 aa)
asnB2Asparagine synthetase [glutamine-hydrolyzing] 1. (653 aa)
AFL51762.1Hypothetical protein. (330 aa)
pyrBAspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (313 aa)
glmS1Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (608 aa)
glnA1Glutamine synthetase 1. (469 aa)
aldAlanine dehydrogenase Ald; Belongs to the AlaDH/PNT family. (372 aa)
purBAdenylosuccinate lyase PurB; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (448 aa)
carBCarbamoyl-phosphate synthase large chain; Belongs to the CarB family. (1166 aa)
purQPhosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (223 aa)
ygeAUncharacterized protein YgeA. (246 aa)
glnA2Glutamine synthetase GlnA. (454 aa)
carACarbamoyl-phosphate synthase small chain; Belongs to the CarA family. (401 aa)
aatAAspartate aminotransferase A. (456 aa)
argHArgininosuccinate lyase ArgH. (467 aa)
purAAdenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (432 aa)
gltB1Glutamate synthase [NADPH] small chain. (485 aa)
gltB2Ferredoxin-dependent glutamate synthase 1. (1574 aa)
argGArgininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (405 aa)
aatB2Aspartate aminotransferase B. (410 aa)
gdhBNAD-specific glutamate dehydrogenase GdhB. (1595 aa)
gabD8Succinate-semialdehyde dehydrogenase [NADP+] GabD; Belongs to the aldehyde dehydrogenase family. (484 aa)
AFL54444.1Ornithine cyclodeaminase/mu-crystallin family protein. (315 aa)
glmS2Glucosamine--fructose-6-phosphate aminotransferase; Isomerizing. (340 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.