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puuA puuA nrtA nrtA nrtB nrtB nasD1 nasD1 narK narK gln gln cah cah cynT1 cynT1 nasA nasA nirD nirD nasD2 nasD2 glnA1 glnA1 norC norC norB norB nirK nirK napA napA napB napB nosZ nosZ glnA2 glnA2 gltB1 gltB1 gltB2 gltB2 cynT2 cynT2 gdhB gdhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
puuAGamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family. (478 aa)
nrtANitrate transport protein NrtA. (430 aa)
nrtBNitrate transport permease protein NrtB. (297 aa)
nasD1Nitrate transport protein NasD. (266 aa)
narKNitrite extrusion protein NarK. (420 aa)
glnGlutamine synthetase. (344 aa)
cahCarbonic anhydrase Cah. (249 aa)
cynT1Carbonic anhydrase CynT; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (215 aa)
nasANitrate reductase NasA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (885 aa)
nirDNitrite reductase small subunit NirD. (110 aa)
nasD2Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (820 aa)
glnA1Glutamine synthetase 1. (469 aa)
norCNitric oxide reductase subunit C. (150 aa)
norBNitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family. (448 aa)
nirKCopper-containing nitrite reductase NirK; Belongs to the multicopper oxidase family. (376 aa)
napAPeriplasmic nitrate reductase NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (834 aa)
napBDiheme cytochrome c NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (168 aa)
nosZNitrous-oxide reductase NosZ; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. (639 aa)
glnA2Glutamine synthetase GlnA. (454 aa)
gltB1Glutamate synthase [NADPH] small chain. (485 aa)
gltB2Ferredoxin-dependent glutamate synthase 1. (1574 aa)
cynT2Carbonic anhydrase CynT; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (215 aa)
gdhBNAD-specific glutamate dehydrogenase GdhB. (1595 aa)
Your Current Organism:
Sinorhizobium fredii USDA257
NCBI taxonomy Id: 1185652
Other names: S. fredii USDA 257, Sinorhizobium fredii USDA 257, Sinorhizobium fredii str. USDA 257, Sinorhizobium fredii strain USDA 257
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