(17 nodes) Starch and sucrose metabolism network (Lipotes vexillifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	LOC103083525	Uncharacterized protein LOC103083525. (985 aa)
	PYGL	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (851 aa)
	AMY2A	Alpha-amylase. (511 aa)
	PGM2L1	Glucose 1,6-bisphosphate synthase. (622 aa)
	AGL	Glycogen debranching enzyme. (1532 aa)
	GYS2	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (701 aa)
	LOC103072565	Isoamylase 3, chloroplastic-like. (717 aa)
	LOC103080592	Starch synthase 1, chloroplastic/amyloplastic-like. (500 aa)
	PYGM	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (842 aa)
	GYG2	Glycogenin-2. (489 aa)
	GYS1	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (738 aa)
	UGP2	UTP--glucose-1-phosphate uridylyltransferase. (508 aa)
	PGM1	Phosphoglucomutase-1 isoform X1; Belongs to the phosphohexose mutase family. (580 aa)
	MGAM	Maltase-glucoamylase, intestinal. (1828 aa)
	LOC103072723	1,4-alpha-glucan-branching enzyme-like. (783 aa)
	GYG1	Glycogenin-1 isoform X1. (350 aa)
	PYGB	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (847 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGL	AMY2A	A0A340WPU5	A0A340WID2	Glycogen debranching enzyme.	Alpha-amylase.	0.940
AGL	GYG1	A0A340WPU5	A0A340YCH1	Glycogen debranching enzyme.	Glycogenin-1 isoform X1.	0.964
AGL	GYG2	A0A340WPU5	A0A340XNE8	Glycogen debranching enzyme.	Glycogenin-2.	0.941
AGL	GYS1	A0A340WPU5	A0A340XPZ3	Glycogen debranching enzyme.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.929
AGL	GYS2	A0A340WPU5	A0A340WR38	Glycogen debranching enzyme.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.917
AGL	LOC103072565	A0A340WPU5	A0A340X200	Glycogen debranching enzyme.	Isoamylase 3, chloroplastic-like.	0.970
AGL	LOC103072723	A0A340WPU5	A0A340YC08	Glycogen debranching enzyme.	1,4-alpha-glucan-branching enzyme-like.	0.980
AGL	LOC103083525	A0A340WPU5	A0A340WHY2	Glycogen debranching enzyme.	Uncharacterized protein LOC103083525.	0.939
AGL	MGAM	A0A340WPU5	A0A340Y5D1	Glycogen debranching enzyme.	Maltase-glucoamylase, intestinal.	0.926
AGL	PGM1	A0A340WPU5	A0A340XYF7	Glycogen debranching enzyme.	Phosphoglucomutase-1 isoform X1; Belongs to the phosphohexose mutase family.	0.974
AGL	PGM2L1	A0A340WPU5	A0A340WKM0	Glycogen debranching enzyme.	Glucose 1,6-bisphosphate synthase.	0.912
AGL	PYGB	A0A340WPU5	A0A340YJE6	Glycogen debranching enzyme.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.996
AGL	PYGL	A0A340WPU5	A0A340WI13	Glycogen debranching enzyme.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.997
AGL	PYGM	A0A340WPU5	A0A340XL07	Glycogen debranching enzyme.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.997
AGL	UGP2	A0A340WPU5	A0A340XYC5	Glycogen debranching enzyme.	UTP--glucose-1-phosphate uridylyltransferase.	0.942
AMY2A	AGL	A0A340WID2	A0A340WPU5	Alpha-amylase.	Glycogen debranching enzyme.	0.940
AMY2A	GYG1	A0A340WID2	A0A340YCH1	Alpha-amylase.	Glycogenin-1 isoform X1.	0.517
AMY2A	LOC103072565	A0A340WID2	A0A340X200	Alpha-amylase.	Isoamylase 3, chloroplastic-like.	0.965
AMY2A	LOC103072723	A0A340WID2	A0A340YC08	Alpha-amylase.	1,4-alpha-glucan-branching enzyme-like.	0.964
AMY2A	LOC103083525	A0A340WID2	A0A340WHY2	Alpha-amylase.	Uncharacterized protein LOC103083525.	0.921