(6 nodes) Mixed, incl. RPGRIP1 family, and DNA topoisomerase binding network (Lipotes vexillifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CEP290	Centrosomal protein of 290 kDa. (2479 aa)
	RPGRIP1	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1. (1216 aa)
	IQCB1	IQ calmodulin-binding motif-containing protein 1 isoform X2. (598 aa)
	RPGR	X-linked retinitis pigmentosa GTPase regulator. (811 aa)
	LOC103082655	Spore wall protein 2-like. (263 aa)
	TOPORS	E3 ubiquitin-protein ligase Topors. (1043 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP290	IQCB1	A0A340WHT2	A0A340WUK0	Centrosomal protein of 290 kDa.	IQ calmodulin-binding motif-containing protein 1 isoform X2.	0.929
CEP290	LOC103082655	A0A340WHT2	A0A340WWL9	Centrosomal protein of 290 kDa.	Spore wall protein 2-like.	0.589
CEP290	RPGR	A0A340WHT2	A0A340WWK9	Centrosomal protein of 290 kDa.	X-linked retinitis pigmentosa GTPase regulator.	0.714
CEP290	RPGRIP1	A0A340WHT2	A0A340WLI4	Centrosomal protein of 290 kDa.	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.688
CEP290	TOPORS	A0A340WHT2	A0A340Y0I0	Centrosomal protein of 290 kDa.	E3 ubiquitin-protein ligase Topors.	0.439
IQCB1	CEP290	A0A340WUK0	A0A340WHT2	IQ calmodulin-binding motif-containing protein 1 isoform X2.	Centrosomal protein of 290 kDa.	0.929
IQCB1	LOC103082655	A0A340WUK0	A0A340WWL9	IQ calmodulin-binding motif-containing protein 1 isoform X2.	Spore wall protein 2-like.	0.481
IQCB1	RPGR	A0A340WUK0	A0A340WWK9	IQ calmodulin-binding motif-containing protein 1 isoform X2.	X-linked retinitis pigmentosa GTPase regulator.	0.535
IQCB1	RPGRIP1	A0A340WUK0	A0A340WLI4	IQ calmodulin-binding motif-containing protein 1 isoform X2.	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.444
IQCB1	TOPORS	A0A340WUK0	A0A340Y0I0	IQ calmodulin-binding motif-containing protein 1 isoform X2.	E3 ubiquitin-protein ligase Topors.	0.616
LOC103082655	CEP290	A0A340WWL9	A0A340WHT2	Spore wall protein 2-like.	Centrosomal protein of 290 kDa.	0.589
LOC103082655	IQCB1	A0A340WWL9	A0A340WUK0	Spore wall protein 2-like.	IQ calmodulin-binding motif-containing protein 1 isoform X2.	0.481
LOC103082655	RPGRIP1	A0A340WWL9	A0A340WLI4	Spore wall protein 2-like.	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.917
LOC103082655	TOPORS	A0A340WWL9	A0A340Y0I0	Spore wall protein 2-like.	E3 ubiquitin-protein ligase Topors.	0.618
RPGR	CEP290	A0A340WWK9	A0A340WHT2	X-linked retinitis pigmentosa GTPase regulator.	Centrosomal protein of 290 kDa.	0.714
RPGR	IQCB1	A0A340WWK9	A0A340WUK0	X-linked retinitis pigmentosa GTPase regulator.	IQ calmodulin-binding motif-containing protein 1 isoform X2.	0.535
RPGR	RPGRIP1	A0A340WWK9	A0A340WLI4	X-linked retinitis pigmentosa GTPase regulator.	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	0.938
RPGR	TOPORS	A0A340WWK9	A0A340Y0I0	X-linked retinitis pigmentosa GTPase regulator.	E3 ubiquitin-protein ligase Topors.	0.618
RPGRIP1	CEP290	A0A340WLI4	A0A340WHT2	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	Centrosomal protein of 290 kDa.	0.688
RPGRIP1	IQCB1	A0A340WLI4	A0A340WUK0	LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.	IQ calmodulin-binding motif-containing protein 1 isoform X2.	0.444