(12 nodes) Mixed, incl. Regulation of glucocorticoid receptor signaling pathway, and Period circadian-like, C-terminal network (Lipotes vexillifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLOCK	Circadian locomoter output cycles protein kaput isoform X1. (853 aa)
	PER3	Period circadian protein homolog 3. (1145 aa)
	CSNK1E	Casein kinase I isoform epsilon isoform X2; Belongs to the protein kinase superfamily. (416 aa)
	PER2	Period circadian protein homolog 2. (1274 aa)
	CRY2	Cryptochrome-2. (593 aa)
	CSNK1D	Casein kinase I isoform delta isoform X1; Belongs to the protein kinase superfamily. (428 aa)
	CRY1	Cryptochrome-1. (587 aa)
	LOC103090855	Deoxyribodipyrimidine photo-lyase-like. (434 aa)
	NPAS2	Neuronal PAS domain-containing protein 2. (806 aa)
	FBXL3	F-box/LRR-repeat protein 3 isoform X1. (429 aa)
	LOC103085653	Period circadian protein homolog 1-like. (220 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3. (632 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL	CLOCK	A0A340YCS5	A0A340WTW6	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Circadian locomoter output cycles protein kaput isoform X1.	0.978
ARNTL	CRY1	A0A340YCS5	A0A340XUA4	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Cryptochrome-1.	0.994
ARNTL	CRY2	A0A340YCS5	A0A340X9J3	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Cryptochrome-2.	0.998
ARNTL	CSNK1D	A0A340YCS5	A0A340XTE3	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Casein kinase I isoform delta isoform X1; Belongs to the protein kinase superfamily.	0.968
ARNTL	CSNK1E	A0A340YCS5	A0A340WYE1	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Casein kinase I isoform epsilon isoform X2; Belongs to the protein kinase superfamily.	0.971
ARNTL	FBXL3	A0A340YCS5	A0A340Y575	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	F-box/LRR-repeat protein 3 isoform X1.	0.560
ARNTL	LOC103085653	A0A340YCS5	A0A340Y6C7	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Period circadian protein homolog 1-like.	0.759
ARNTL	LOC103090855	A0A340YCS5	A0A340XUT2	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Deoxyribodipyrimidine photo-lyase-like.	0.951
ARNTL	NPAS2	A0A340YCS5	A0A340Y3W5	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Neuronal PAS domain-containing protein 2.	0.967
ARNTL	PER2	A0A340YCS5	A0A340X1E5	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Period circadian protein homolog 2.	0.987
ARNTL	PER3	A0A340YCS5	A0A340WV88	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	Period circadian protein homolog 3.	0.784
CLOCK	ARNTL	A0A340WTW6	A0A340YCS5	Circadian locomoter output cycles protein kaput isoform X1.	Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3.	0.978
CLOCK	CRY1	A0A340WTW6	A0A340XUA4	Circadian locomoter output cycles protein kaput isoform X1.	Cryptochrome-1.	0.976
CLOCK	CRY2	A0A340WTW6	A0A340X9J3	Circadian locomoter output cycles protein kaput isoform X1.	Cryptochrome-2.	0.983
CLOCK	CSNK1D	A0A340WTW6	A0A340XTE3	Circadian locomoter output cycles protein kaput isoform X1.	Casein kinase I isoform delta isoform X1; Belongs to the protein kinase superfamily.	0.966
CLOCK	CSNK1E	A0A340WTW6	A0A340WYE1	Circadian locomoter output cycles protein kaput isoform X1.	Casein kinase I isoform epsilon isoform X2; Belongs to the protein kinase superfamily.	0.956
CLOCK	FBXL3	A0A340WTW6	A0A340Y575	Circadian locomoter output cycles protein kaput isoform X1.	F-box/LRR-repeat protein 3 isoform X1.	0.471
CLOCK	LOC103085653	A0A340WTW6	A0A340Y6C7	Circadian locomoter output cycles protein kaput isoform X1.	Period circadian protein homolog 1-like.	0.606
CLOCK	LOC103090855	A0A340WTW6	A0A340XUT2	Circadian locomoter output cycles protein kaput isoform X1.	Deoxyribodipyrimidine photo-lyase-like.	0.770
CLOCK	NPAS2	A0A340WTW6	A0A340Y3W5	Circadian locomoter output cycles protein kaput isoform X1.	Neuronal PAS domain-containing protein 2.	0.910