23 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL14	60S ribosomal protein L14. (211 aa)
	LOC103068932	60S ribosomal protein L7-like. (222 aa)
	LOC103084934	Uncharacterized protein LOC103084934. (368 aa)
	RPS23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	LOC103089773	60S ribosomal protein L18-like. (203 aa)
	RPS2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (299 aa)
	RPL30	60S ribosomal protein L30. (115 aa)
	RPS3	40S ribosomal protein S3 isoform X3; Belongs to the universal ribosomal protein uS3 family. (254 aa)
	RPL37A	60S ribosomal protein L37a. (92 aa)
	RPL7A	60S ribosomal protein L7a. (266 aa)
	RPL11	60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	LOC103089460	60S ribosomal protein L24-like. (93 aa)
	RPL27A	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (111 aa)
	RPS11	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPL8	60S ribosomal protein L8. (265 aa)
	LOC103071402	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (161 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	LOC103084821	60S ribosomal protein L35a-like. (113 aa)
	LOC103071636	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	LOC103085101	60S ribosomal protein L23-like; Belongs to the universal ribosomal protein uL14 family. (166 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	RPL21	60S ribosomal protein L21. (160 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103068932	LOC103071402	A0A340WFU9	A0A340XTW9	60S ribosomal protein L7-like.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.993
LOC103068932	LOC103071636	A0A340WFU9	A0A340Y8Q3	60S ribosomal protein L7-like.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.996
LOC103068932	LOC103084821	A0A340WFU9	A0A340Y0Y5	60S ribosomal protein L7-like.	60S ribosomal protein L35a-like.	0.995
LOC103068932	LOC103084934	A0A340WFU9	A0A340WNL9	60S ribosomal protein L7-like.	Uncharacterized protein LOC103084934.	0.999
LOC103068932	LOC103085101	A0A340WFU9	A0A340Y970	60S ribosomal protein L7-like.	60S ribosomal protein L23-like; Belongs to the universal ribosomal protein uL14 family.	0.996
LOC103068932	LOC103089460	A0A340WFU9	A0A340XJ42	60S ribosomal protein L7-like.	60S ribosomal protein L24-like.	0.996
LOC103068932	LOC103089773	A0A340WFU9	A0A340X2N1	60S ribosomal protein L7-like.	60S ribosomal protein L18-like.	0.994
LOC103068932	RPL11	A0A340WFU9	A0A340XIY4	60S ribosomal protein L7-like.	60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family.	0.999
LOC103068932	RPL12	A0A340WFU9	A0A340YFV5	60S ribosomal protein L7-like.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.998
LOC103068932	RPL14	A0A340WFU9	A0A340WFJ6	60S ribosomal protein L7-like.	60S ribosomal protein L14.	0.999
LOC103068932	RPL19	A0A340WFU9	A0A340XVF2	60S ribosomal protein L7-like.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
LOC103068932	RPL21	A0A340WFU9	A0A340YJ91	60S ribosomal protein L7-like.	60S ribosomal protein L21.	0.999
LOC103068932	RPL27A	A0A340WFU9	A0A340XLL3	60S ribosomal protein L7-like.	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.991
LOC103068932	RPL30	A0A340WFU9	A0A340X6N7	60S ribosomal protein L7-like.	60S ribosomal protein L30.	0.998
LOC103068932	RPL37A	A0A340WFU9	A0A340XAC0	60S ribosomal protein L7-like.	60S ribosomal protein L37a.	0.993
LOC103068932	RPL7A	A0A340WFU9	A0A340XC14	60S ribosomal protein L7-like.	60S ribosomal protein L7a.	0.999
LOC103068932	RPL8	A0A340WFU9	A0A340XTH3	60S ribosomal protein L7-like.	60S ribosomal protein L8.	0.999
LOC103068932	RPS11	A0A340WFU9	A0A340XQ22	60S ribosomal protein L7-like.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.997
LOC103068932	RPS2	A0A340WFU9	A0A340X2V9	60S ribosomal protein L7-like.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.997
LOC103068932	RPS20	A0A340WFU9	A0A340XY03	60S ribosomal protein L7-like.	40S ribosomal protein S20.	0.997