(10 nodes) Mixed, incl. L6 membrane, and Connexin homologues network (Lipotes vexillifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CST9	Cystatin-9. (153 aa)
	GJB3	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (270 aa)
	GJB4	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family. (318 aa)
	GJB5	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (273 aa)
	GPA33	Cell surface A33 antigen. (319 aa)
	VSIG1	LOW QUALITY PROTEIN: V-set and immunoglobulin domain-containing protein 1. (422 aa)
	LOC103086199	Melanoma-associated antigen B18-like. (344 aa)
	PLLP	Plasmolipin. (182 aa)
	TM4SF20	Transmembrane 4 L6 family member 20. (230 aa)
	TM4SF4	Transmembrane 4 L6 family member 4. (203 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CST9	LOC103086199	A0A340WWQ2	A0A340XWA3	Cystatin-9.	Melanoma-associated antigen B18-like.	0.667
CST9	VSIG1	A0A340WWQ2	A0A340XQX8	Cystatin-9.	LOW QUALITY PROTEIN: V-set and immunoglobulin domain-containing protein 1.	0.661
GJB3	GJB4	A0A340WWZ4	A0A340WX49	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family.	0.486
GJB3	GJB5	A0A340WWZ4	A0A340X3S8	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.479
GJB3	GPA33	A0A340WWZ4	A0A340XGK4	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Cell surface A33 antigen.	0.542
GJB3	PLLP	A0A340WWZ4	A0A340Y3R6	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Plasmolipin.	0.452
GJB3	TM4SF20	A0A340WWZ4	A0A340Y942	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transmembrane 4 L6 family member 20.	0.617
GJB3	TM4SF4	A0A340WWZ4	A0A340YH25	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transmembrane 4 L6 family member 4.	0.450
GJB4	GJB3	A0A340WX49	A0A340WWZ4	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.486
GJB4	PLLP	A0A340WX49	A0A340Y3R6	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family.	Plasmolipin.	0.617
GJB4	TM4SF20	A0A340WX49	A0A340Y942	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family.	Transmembrane 4 L6 family member 20.	0.729
GJB4	TM4SF4	A0A340WX49	A0A340YH25	Gap junction beta-4 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. Belongs to the connexin family.	Transmembrane 4 L6 family member 4.	0.620
GJB5	GJB3	A0A340X3S8	A0A340WWZ4	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.479
GJB5	GPA33	A0A340X3S8	A0A340XGK4	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Cell surface A33 antigen.	0.513
GJB5	PLLP	A0A340X3S8	A0A340Y3R6	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Plasmolipin.	0.439
GJB5	TM4SF20	A0A340X3S8	A0A340Y942	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Transmembrane 4 L6 family member 20.	0.612
GJB5	VSIG1	A0A340X3S8	A0A340XQX8	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	LOW QUALITY PROTEIN: V-set and immunoglobulin domain-containing protein 1.	0.712
GPA33	GJB3	A0A340XGK4	A0A340WWZ4	Cell surface A33 antigen.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.542
GPA33	GJB5	A0A340XGK4	A0A340X3S8	Cell surface A33 antigen.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.513
GPA33	PLLP	A0A340XGK4	A0A340Y3R6	Cell surface A33 antigen.	Plasmolipin.	0.668