13 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPS35	28S ribosomal protein S35, mitochondrial. (325 aa)
	MRPS22	28S ribosomal protein S22, mitochondrial. (359 aa)
	MRPS6	28S ribosomal protein S6, mitochondrial. (124 aa)
	MRPS14	28S ribosomal protein S14, mitochondrial. (128 aa)
	MRPS15	28S ribosomal protein S15, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS15 family. (264 aa)
	MRPS17	28S ribosomal protein S17, mitochondrial. (130 aa)
	MRPS16	28S ribosomal protein S16, mitochondrial. (135 aa)
	MRPS27	28S ribosomal protein S27, mitochondrial isoform X1. (416 aa)
	DAP3	28S ribosomal protein S29, mitochondrial isoform X1. (397 aa)
	MRPS25	28S ribosomal protein S25, mitochondrial. (173 aa)
	PTCD3	Pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1. (692 aa)
	MRPS5	28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family. (430 aa)
	MRPS31	28S ribosomal protein S31, mitochondrial isoform X1. (394 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	MRPS14	A0A340XG27	A0A340WWG8	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S14, mitochondrial.	0.998
DAP3	MRPS15	A0A340XG27	A0A340WWW1	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S15, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS15 family.	0.998
DAP3	MRPS16	A0A340XG27	A0A340X433	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S16, mitochondrial.	0.998
DAP3	MRPS17	A0A340XG27	A0A340X090	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S17, mitochondrial.	0.998
DAP3	MRPS22	A0A340XG27	A0A340WEJ0	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S22, mitochondrial.	0.999
DAP3	MRPS25	A0A340XG27	A0A340XJN2	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S25, mitochondrial.	0.998
DAP3	MRPS27	A0A340XG27	A0A340X710	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S27, mitochondrial isoform X1.	0.999
DAP3	MRPS31	A0A340XG27	A0A340YFP7	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S31, mitochondrial isoform X1.	0.998
DAP3	MRPS35	A0A340XG27	A0A340WA75	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S35, mitochondrial.	0.999
DAP3	MRPS5	A0A340XG27	A0A340YFN9	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.	0.999
DAP3	MRPS6	A0A340XG27	A0A340WG64	28S ribosomal protein S29, mitochondrial isoform X1.	28S ribosomal protein S6, mitochondrial.	0.997
DAP3	PTCD3	A0A340XG27	A0A340Y543	28S ribosomal protein S29, mitochondrial isoform X1.	Pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1.	0.998
MRPS14	DAP3	A0A340WWG8	A0A340XG27	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S29, mitochondrial isoform X1.	0.998
MRPS14	MRPS15	A0A340WWG8	A0A340WWW1	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S15, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS15 family.	0.999
MRPS14	MRPS16	A0A340WWG8	A0A340X433	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S16, mitochondrial.	0.999
MRPS14	MRPS17	A0A340WWG8	A0A340X090	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S17, mitochondrial.	0.999
MRPS14	MRPS22	A0A340WWG8	A0A340WEJ0	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S22, mitochondrial.	0.998
MRPS14	MRPS25	A0A340WWG8	A0A340XJN2	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S25, mitochondrial.	0.999
MRPS14	MRPS27	A0A340WWG8	A0A340X710	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S27, mitochondrial isoform X1.	0.998
MRPS14	MRPS31	A0A340WWG8	A0A340YFP7	28S ribosomal protein S14, mitochondrial.	28S ribosomal protein S31, mitochondrial isoform X1.	0.998