STRINGSTRING
EFNA1 EFNA1 BMPR2 BMPR2 TNFRSF1A TNFRSF1A BMP2 BMP2 EMILIN1 EMILIN1 GATA4 GATA4 TBX20 TBX20 BMP4 BMP4 SMAD6 SMAD6 TWIST1 TWIST1 SOX9 SOX9 SLIT3 SLIT3 HEY2 HEY2 TGFB1 TGFB1 NOTCH1 NOTCH1 GATA5 GATA5 TNFRSF1B TNFRSF1B GATA3 GATA3 RB1 RB1 TIE1 TIE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFNA1ephrin-A1; Belongs to the ephrin family. (242 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
TNFRSF1ATumor necrosis factor receptor superfamily member 1A. (445 aa)
BMP2Bone morphogenetic protein 2. (395 aa)
EMILIN1EMILIN-1. (1015 aa)
GATA4Transcription factor GATA-4. (435 aa)
TBX20T-box transcription factor TBX20. (449 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
SMAD6Mothers against decapentaplegic homolog. (495 aa)
TWIST1Twist-related protein 1 isoform X1. (204 aa)
SOX9Transcription factor SOX-9 isoform X1. (509 aa)
SLIT3Slit homolog 3 protein. (1523 aa)
HEY2Hairy/enhancer-of-split related with YRPW motif protein 2. (352 aa)
TGFB1Transforming growth factor beta; Belongs to the TGF-beta family. (391 aa)
NOTCH1Neurogenic locus notch homolog protein 1. (2536 aa)
GATA5Transcription factor GATA-5. (407 aa)
TNFRSF1BTumor necrosis factor receptor superfamily member 1B isoform X1. (453 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
RB1Retinoblastoma-associated protein isoform X1. (929 aa)
TIE1Tyrosine-protein kinase receptor Tie-1 isoform X1. (1139 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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