22 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KCNN3	Small conductance calcium-activated potassium channel protein 3 isoform X1. (738 aa)
	KCNN1	Small conductance calcium-activated potassium channel protein 1 isoform X1. (546 aa)
	KCNJ11	ATP-sensitive inward rectifier potassium channel 11 isoform X1. (388 aa)
	KCNJ6	G protein-activated inward rectifier potassium channel 2. (423 aa)
	KCNH2	Potassium voltage-gated channel subfamily H member 2. (1198 aa)
	KCNJ15	ATP-sensitive inward rectifier potassium channel 15 isoform X1. (407 aa)
	KCNJ3	G protein-activated inward rectifier potassium channel 1 isoform X1. (501 aa)
	KCNK1	Potassium channel subfamily K member. (336 aa)
	KCNH7	Potassium voltage-gated channel subfamily H member 7. (1197 aa)
	KCNJ1	ATP-sensitive inward rectifier potassium channel 1 isoform X1. (384 aa)
	KCNJ14	ATP-sensitive inward rectifier potassium channel 14. (434 aa)
	KCNJ5	G protein-activated inward rectifier potassium channel 4 isoform X1. (419 aa)
	KCNJ13	Inward rectifier potassium channel 13 isoform X1. (360 aa)
	KCNJ2	Inward rectifier potassium channel 2. (427 aa)
	KCNJ4	Inward rectifier potassium channel 4. (445 aa)
	KCNJ16	Inward rectifier potassium channel 16. (419 aa)
	KCNJ8	ATP-sensitive inward rectifier potassium channel 8. (424 aa)
	KCNJ12	ATP-sensitive inward rectifier potassium channel 12. (427 aa)
	KCNE2	Potassium voltage-gated channel subfamily E member 2. (123 aa)
	KCNJ10	ATP-sensitive inward rectifier potassium channel 10. (379 aa)
	KCNJ9	LOW QUALITY PROTEIN: G protein-activated inward rectifier potassium channel 3. (469 aa)
	KCNH6	LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 6. (904 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KCNE2	KCNH2	A0A340WHP2	A0A340YA31	Potassium voltage-gated channel subfamily E member 2.	Potassium voltage-gated channel subfamily H member 2.	0.747
KCNE2	KCNH6	A0A340WHP2	A0A340XCR0	Potassium voltage-gated channel subfamily E member 2.	LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 6.	0.589
KCNE2	KCNH7	A0A340WHP2	A0A340XWG6	Potassium voltage-gated channel subfamily E member 2.	Potassium voltage-gated channel subfamily H member 7.	0.436
KCNE2	KCNJ15	A0A340WHP2	A0A340YA16	Potassium voltage-gated channel subfamily E member 2.	ATP-sensitive inward rectifier potassium channel 15 isoform X1.	0.450
KCNE2	KCNJ2	A0A340WHP2	A0A340X5U6	Potassium voltage-gated channel subfamily E member 2.	Inward rectifier potassium channel 2.	0.679
KCNE2	KCNJ5	A0A340WHP2	A0A340XU68	Potassium voltage-gated channel subfamily E member 2.	G protein-activated inward rectifier potassium channel 4 isoform X1.	0.600
KCNE2	KCNJ8	A0A340WHP2	A0A340WP50	Potassium voltage-gated channel subfamily E member 2.	ATP-sensitive inward rectifier potassium channel 8.	0.447
KCNH2	KCNE2	A0A340YA31	A0A340WHP2	Potassium voltage-gated channel subfamily H member 2.	Potassium voltage-gated channel subfamily E member 2.	0.747
KCNH2	KCNJ2	A0A340YA31	A0A340X5U6	Potassium voltage-gated channel subfamily H member 2.	Inward rectifier potassium channel 2.	0.618
KCNH2	KCNJ5	A0A340YA31	A0A340XU68	Potassium voltage-gated channel subfamily H member 2.	G protein-activated inward rectifier potassium channel 4 isoform X1.	0.535
KCNH2	KCNJ8	A0A340YA31	A0A340WP50	Potassium voltage-gated channel subfamily H member 2.	ATP-sensitive inward rectifier potassium channel 8.	0.718
KCNH6	KCNE2	A0A340XCR0	A0A340WHP2	LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily H member 6.	Potassium voltage-gated channel subfamily E member 2.	0.589
KCNH7	KCNE2	A0A340XWG6	A0A340WHP2	Potassium voltage-gated channel subfamily H member 7.	Potassium voltage-gated channel subfamily E member 2.	0.436
KCNH7	KCNJ3	A0A340XWG6	A0A340Y0X7	Potassium voltage-gated channel subfamily H member 7.	G protein-activated inward rectifier potassium channel 1 isoform X1.	0.510
KCNH7	KCNJ5	A0A340XWG6	A0A340XU68	Potassium voltage-gated channel subfamily H member 7.	G protein-activated inward rectifier potassium channel 4 isoform X1.	0.451
KCNJ1	KCNJ10	A0A340XWG4	A0A340XIU7	ATP-sensitive inward rectifier potassium channel 1 isoform X1.	ATP-sensitive inward rectifier potassium channel 10.	0.529
KCNJ1	KCNJ16	A0A340XWG4	A0A340WZG8	ATP-sensitive inward rectifier potassium channel 1 isoform X1.	Inward rectifier potassium channel 16.	0.578
KCNJ10	KCNJ1	A0A340XIU7	A0A340XWG4	ATP-sensitive inward rectifier potassium channel 10.	ATP-sensitive inward rectifier potassium channel 1 isoform X1.	0.529
KCNJ10	KCNJ12	A0A340XIU7	A0A340WI69	ATP-sensitive inward rectifier potassium channel 10.	ATP-sensitive inward rectifier potassium channel 12.	0.481
KCNJ10	KCNJ15	A0A340XIU7	A0A340YA16	ATP-sensitive inward rectifier potassium channel 10.	ATP-sensitive inward rectifier potassium channel 15 isoform X1.	0.518