10 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PDE6C	Phosphodiesterase. (860 aa)
	GNAT1	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1. (350 aa)
	CHRM1	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. (459 aa)
	RHO	Rhodopsin. (348 aa)
	GNA11	Guanine nucleotide-binding protein subunit alpha-11. (359 aa)
	RS1	Retinoschisin. (224 aa)
	GNAQ	Guanine nucleotide-binding protein G(Q) subunit alpha. (359 aa)
	AIPL1	Aryl-hydrocarbon-interacting protein-like 1. (326 aa)
	RDH11	Retinol dehydrogenase 11 isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
	DHRS12	Dehydrogenase/reductase SDR family member 12. (317 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIPL1	GNAT1	A0A340WQ57	A0A340Y1F3	Aryl-hydrocarbon-interacting protein-like 1.	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1.	0.699
AIPL1	PDE6C	A0A340WQ57	A0A340YGR1	Aryl-hydrocarbon-interacting protein-like 1.	Phosphodiesterase.	0.498
AIPL1	RHO	A0A340WQ57	A0A340XJP6	Aryl-hydrocarbon-interacting protein-like 1.	Rhodopsin.	0.735
CHRM1	GNA11	A0A340XS61	A0A340XG36	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Guanine nucleotide-binding protein subunit alpha-11.	0.961
CHRM1	GNAQ	A0A340XS61	A0A340XET8	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.950
GNA11	CHRM1	A0A340XG36	A0A340XS61	Guanine nucleotide-binding protein subunit alpha-11.	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	0.961
GNA11	GNAQ	A0A340XG36	A0A340XET8	Guanine nucleotide-binding protein subunit alpha-11.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.942
GNA11	RHO	A0A340XG36	A0A340XJP6	Guanine nucleotide-binding protein subunit alpha-11.	Rhodopsin.	0.424
GNAQ	CHRM1	A0A340XET8	A0A340XS61	Guanine nucleotide-binding protein G(Q) subunit alpha.	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	0.950
GNAQ	GNA11	A0A340XET8	A0A340XG36	Guanine nucleotide-binding protein G(Q) subunit alpha.	Guanine nucleotide-binding protein subunit alpha-11.	0.942
GNAQ	RHO	A0A340XET8	A0A340XJP6	Guanine nucleotide-binding protein G(Q) subunit alpha.	Rhodopsin.	0.405
GNAT1	AIPL1	A0A340Y1F3	A0A340WQ57	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1.	Aryl-hydrocarbon-interacting protein-like 1.	0.699
GNAT1	PDE6C	A0A340Y1F3	A0A340YGR1	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1.	Phosphodiesterase.	0.643
GNAT1	RHO	A0A340Y1F3	A0A340XJP6	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1.	Rhodopsin.	0.999
PDE6C	AIPL1	A0A340YGR1	A0A340WQ57	Phosphodiesterase.	Aryl-hydrocarbon-interacting protein-like 1.	0.498
PDE6C	GNAT1	A0A340YGR1	A0A340Y1F3	Phosphodiesterase.	Guanine nucleotide-binding protein G(T) subunit alpha-1 isoform X1.	0.643
PDE6C	RHO	A0A340YGR1	A0A340XJP6	Phosphodiesterase.	Rhodopsin.	0.558
RHO	AIPL1	A0A340XJP6	A0A340WQ57	Rhodopsin.	Aryl-hydrocarbon-interacting protein-like 1.	0.735
RHO	GNA11	A0A340XJP6	A0A340XG36	Rhodopsin.	Guanine nucleotide-binding protein subunit alpha-11.	0.424
RHO	GNAQ	A0A340XJP6	A0A340XET8	Rhodopsin.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.405