STRINGSTRING
TGFB1I1 TGFB1I1 NCOA3 NCOA3 LOC103078878 LOC103078878 LOC103087942 LOC103087942 PPID PPID STAT5B STAT5B NCOA2 NCOA2 SMAD3 SMAD3 NRBF2 NRBF2 ASXL1 ASXL1 PPARGC1B PPARGC1B GRIP1 GRIP1 NCOA7 NCOA7 TMF1 TMF1 FOXP1 FOXP1 NCOA6 NCOA6 CCDC62 CCDC62 PPARGC1A PPARGC1A TRIP4 TRIP4 RARG RARG PRKCB PRKCB LRIF1 LRIF1 LOC103070811 LOC103070811 PROX1 PROX1 BUD31 BUD31 MED13 MED13 LOC103072469 LOC103072469 MED17 MED17 MED30 MED30 PAGR1 PAGR1 PRMT2 PRMT2 LOC103073288 LOC103073288 TADA3 TADA3 PRAME PRAME SLC30A9 SLC30A9 YWHAH YWHAH VPRBP VPRBP RNF14 RNF14 LOC103084951 LOC103084951 THRAP3 THRAP3 TOB2 TOB2 EP300 EP300 LEF1 LEF1 TCF21 TCF21 RXRA RXRA NR4A1 NR4A1 WIPI1 WIPI1 NCOA1 NCOA1 PARK7 PARK7 NR1H3 NR1H3 LOC103083865 LOC103083865 LCOR LCOR LOC103082218 LOC103082218 NRIP1 NRIP1 CRY2 CRY2 NR0B1 NR0B1 ZNF366 ZNF366 MMS19 MMS19 NKX3-1 NKX3-1 ESR1 ESR1 LATS1 LATS1 MYOD1 MYOD1 SIRT1 SIRT1 TRIM68 TRIM68 DDX5 DDX5 ARID1A ARID1A LOC103077201 LOC103077201 SNW1 SNW1 MED16 MED16 ZBTB7A ZBTB7A PADI2 PADI2 SMARCA4 SMARCA4 DAXX DAXX BRD8 BRD8 KDM1A KDM1A TAF10 TAF10 PRPF6 PRPF6 NR4A3 NR4A3 NSD1 NSD1 MED25 MED25 NCOR1 NCOR1 CRY1 CRY1 BCAS3 BCAS3 LOC103090855 LOC103090855 MED1 MED1 CRX CRX DCAF13 DCAF13 NR1H4 NR1H4 NR1H2 NR1H2 VDR VDR C1D C1D FOXH1 FOXH1 CTNNB1 CTNNB1 MED4 MED4 KDM3A KDM3A GTF2H1 GTF2H1 LOC103076397 LOC103076397 MED24 MED24 SMARCE1 SMARCE1 CNOT1 CNOT1 TRIM24 TRIM24 STRN STRN GTF2B GTF2B CALR CALR TCF7L2 TCF7L2 DDX54 DDX54 TAF7L TAF7L NR4A2 NR4A2 ARID5A ARID5A CTBP2 CTBP2 MED12 MED12 PKN1 PKN1 ACTN4 ACTN4 RNF6 RNF6 SMARCD3 SMARCD3 TACC2 TACC2 TACC1 TACC1 ARGFX ARGFX HIF1A HIF1A NR1I2 NR1I2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TGFB1I1Transforming growth factor beta-1-induced transcript 1 protein; Belongs to the paxillin family. (456 aa)
NCOA3Nuclear receptor coactivator. (1462 aa)
LOC103078878Dyslexia susceptibility 1 candidate gene 1 protein-like. (90 aa)
LOC103087942Signal transducer and activator of transcription 5A-like. (237 aa)
PPIDPeptidyl-prolyl cis-trans isomerase D. (371 aa)
STAT5BSignal transducer and activator of transcription. (792 aa)
NCOA2Nuclear receptor coactivator. (1464 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
NRBF2Nuclear receptor-binding factor 2 isoform X1. (288 aa)
ASXL1Putative Polycomb group protein ASXL1. (1544 aa)
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta. (1014 aa)
GRIP1Glutamate receptor-interacting protein 1. (1022 aa)
NCOA7Nuclear receptor coactivator 7 isoform X1. (932 aa)
TMF1TATA element modulatory factor. (1093 aa)
FOXP1Forkhead box protein P1 isoform X1. (675 aa)
NCOA6Nuclear receptor coactivator 6 isoform X1. (2039 aa)
CCDC62Coiled-coil domain-containing protein 62. (629 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (796 aa)
TRIP4Activating signal cointegrator 1. (563 aa)
RARGRetinoic acid receptor gamma isoform X1. (458 aa)
PRKCBProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (673 aa)
LRIF1Ligand-dependent nuclear receptor-interacting factor 1. (762 aa)
LOC103070811Leucine-rich repeat-containing protein PRAME-like. (395 aa)
PROX1Prospero homeobox protein 1. (737 aa)
BUD31Protein BUD31 homolog. (144 aa)
MED13Mediator of RNA polymerase II transcription subunit 13-like. (1269 aa)
LOC103072469Leucine-rich repeat-containing protein PRAME-like. (482 aa)
MED17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (651 aa)
MED30Mediator of RNA polymerase II transcription subunit 30 isoform X1. (178 aa)
PAGR1PAXIP1-associated glutamate-rich protein 1. (254 aa)
PRMT2Protein arginine N-methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (434 aa)
LOC103073288Leucine-rich repeat-containing protein PRAME-like. (398 aa)
TADA3Transcriptional adapter 3 isoform X1. (432 aa)
PRAMEMelanoma antigen preferentially expressed in tumors. (551 aa)
SLC30A9Zinc transporter 9 isoform X1. (566 aa)
YWHAH14-3-3 protein eta; Belongs to the 14-3-3 family. (246 aa)
VPRBPProtein VPRBP. (1510 aa)
RNF14RBR-type E3 ubiquitin transferase. (474 aa)
LOC103084951Transcription initiation factor TFIID subunit 7-like. (349 aa)
THRAP3Thyroid hormone receptor-associated protein 3. (958 aa)
TOB2Protein Tob2. (345 aa)
EP300Histone acetyltransferase p300. (2420 aa)
LEF1Lymphoid enhancer-binding factor 1 isoform X1. (399 aa)
TCF21LOW QUALITY PROTEIN: transcription factor 21. (179 aa)
RXRARetinoic acid receptor RXR-alpha isoform X1. (439 aa)
NR4A1Nuclear receptor subfamily 4 group A member 1 isoform X1. (598 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1. (447 aa)
NCOA1Nuclear receptor coactivator. (1440 aa)
PARK7Protein DJ-1. (189 aa)
NR1H3Oxysterols receptor LXR-alpha isoform X1. (447 aa)
LOC103083865Uncharacterized protein C10orf12 homolog. (1417 aa)
LCORLigand-dependent corepressor isoform X1. (433 aa)
LOC103082218Dyslexia susceptibility 1 candidate gene 1 protein homolog. (329 aa)
NRIP1Nuclear receptor-interacting protein 1. (1156 aa)
CRY2Cryptochrome-2. (593 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (464 aa)
ZNF366Zinc finger protein 366. (750 aa)
MMS19MMS19 nucleotide excision repair protein homolog isoform X1. (1030 aa)
NKX3-1Homeobox protein Nkx-3.1 isoform X1. (245 aa)
ESR1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (595 aa)
LATS1Serine/threonine-protein kinase LATS1. (1128 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
SIRT1LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-1. (695 aa)
TRIM68E3 ubiquitin-protein ligase TRIM68 isoform X1. (533 aa)
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (614 aa)
ARID1AAT-rich interactive domain-containing protein 1A. (2224 aa)
LOC103077201Uncharacterized protein C1orf64 homolog. (232 aa)
SNW1SNW domain-containing protein 1 isoform X1. (536 aa)
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (867 aa)
ZBTB7AZinc finger and BTB domain-containing protein 7A. (585 aa)
PADI2Protein-arginine deiminase type-2. (665 aa)
SMARCA4Transcription activator BRG1. (1619 aa)
DAXXDeath domain-associated protein 6. (757 aa)
BRD8LOW QUALITY PROTEIN: bromodomain-containing protein 8. (958 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (877 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
PRPF6pre-mRNA-processing factor 6 isoform X1. (941 aa)
NR4A3Nuclear receptor subfamily 4 group A member 3 isoform X1. (636 aa)
NSD1Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1. (2698 aa)
MED25Mediator of RNA polymerase II transcription subunit 25. (747 aa)
NCOR1Nuclear receptor corepressor 1 isoform X1. (2431 aa)
CRY1Cryptochrome-1. (587 aa)
BCAS3Breast carcinoma-amplified sequence 3 isoform X1. (924 aa)
LOC103090855Deoxyribodipyrimidine photo-lyase-like. (434 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1579 aa)
CRXCone-rod homeobox protein. (300 aa)
DCAF13DDB1- and CUL4-associated factor 13. (445 aa)
NR1H4Bile acid receptor isoform X1. (486 aa)
NR1H2Oxysterols receptor LXR-beta isoform X1. (449 aa)
VDRVitamin D3 receptor isoform X1. (427 aa)
C1DNuclear nucleic acid-binding protein C1D. (141 aa)
FOXH1Forkhead box protein H1. (360 aa)
CTNNB1Catenin beta-1 isoform X1. (781 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (282 aa)
KDM3ALysine-specific demethylase 3A isoform X1. (1322 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
LOC103076397Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (905 aa)
MED24Mediator of RNA polymerase II transcription subunit 24 isoform X1. (1008 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (411 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X1. (2376 aa)
TRIM24Transcription intermediary factor 1-alpha isoform X1. (1050 aa)
STRNStriatin isoform X1. (780 aa)
GTF2BTranscription initiation factor IIB. (316 aa)
CALRCalreticulin. (415 aa)
TCF7L2Transcription factor 7-like 2. (584 aa)
DDX54ATP-dependent RNA helicase DDX54; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (876 aa)
TAF7LTranscription initiation factor TFIID subunit 7-like. (469 aa)
NR4A2Nuclear receptor subfamily 4 group A member 2 isoform X1. (609 aa)
ARID5AAT-rich interactive domain-containing protein 5A. (675 aa)
CTBP2C-terminal-binding protein 2-like isoform X1. (983 aa)
MED12Mediator of RNA polymerase II transcription subunit 12 isoform X1. (2185 aa)
PKN1Serine/threonine-protein kinase N1 isoform X2. (950 aa)
ACTN4Alpha-actinin-4 isoform X1. (933 aa)
RNF6E3 ubiquitin-protein ligase RNF6. (663 aa)
SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3. (483 aa)
TACC2Transforming acidic coiled-coil-containing protein 2 isoform X1. (1026 aa)
TACC1Transforming acidic coiled-coil-containing protein 1 isoform X1. (798 aa)
ARGFXLOW QUALITY PROTEIN: arginine-fifty homeobox. (299 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X2. (822 aa)
NR1I2LOW QUALITY PROTEIN: nuclear receptor subfamily 1, group I, member 2. (327 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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