STRINGSTRING
SMG1 SMG1 EIF4E EIF4E DDX25 DDX25 MAEL MAEL PIWIL1 PIWIL1 TDRD5 TDRD5 PIWIL2 PIWIL2 CLOCK CLOCK NSUN2 NSUN2 PASD1 PASD1 TDRD1 TDRD1 DDX4 DDX4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMG1Serine/threonine-protein kinase SMG1 isoform X1; Belongs to the PI3/PI4-kinase family. (3658 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (230 aa)
DDX25ATP-dependent RNA helicase DDX25. (483 aa)
MAELProtein maelstrom homolog isoform X1. (434 aa)
PIWIL1Piwi-like protein 1; Belongs to the argonaute family. (861 aa)
TDRD5Tudor domain-containing protein 5. (1046 aa)
PIWIL2Piwi-like protein 2 isoform X1; Belongs to the argonaute family. (971 aa)
CLOCKCircadian locomoter output cycles protein kaput isoform X1. (853 aa)
NSUN2LOW QUALITY PROTEIN: tRNA (Cytosine(34)-C(5))-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (783 aa)
PASD1PAS domain-containing protein 1. (354 aa)
TDRD1Tudor domain-containing protein 1. (1046 aa)
DDX4Probable ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family. (706 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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