STRINGSTRING
BICD2 BICD2 GBP5 GBP5 IFT20 IFT20 VPS13D VPS13D GOLPH3 GOLPH3 PAQR3 PAQR3 ZDHHC15 ZDHHC15 OBSL1 OBSL1 LOC103076049 LOC103076049 RAB6A RAB6A VPS13C VPS13C SORL1 SORL1 FAM65A FAM65A RAB6B RAB6B TMED10 TMED10 RAB33B RAB33B GCC2 GCC2 COG7 COG7 OPTN OPTN VPS13A VPS13A PACS1 PACS1 ARFRP1 ARFRP1 ARL5A ARL5A CSNK1D CSNK1D SYS1 SYS1 LOC103071049 LOC103071049 ARL1 ARL1 GAK GAK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BICD2Protein bicaudal D homolog 2 isoform X1. (836 aa)
GBP5Guanylate-binding protein 5. (586 aa)
IFT20LOW QUALITY PROTEIN: intraflagellar transport 20 homolog (Chlamydomonas). (159 aa)
VPS13DVacuolar protein sorting-associated protein 13D. (4249 aa)
GOLPH3Golgi phosphoprotein 3. (299 aa)
PAQR3Progestin and adipoQ receptor family member 3. (311 aa)
ZDHHC15Palmitoyltransferase ZDHHC15. (138 aa)
OBSL1Obscurin-like protein 1 isoform X1. (1901 aa)
LOC103076049ADP-ribosylation factor-like protein 5B-like. (142 aa)
RAB6ARas-related protein Rab-6A. (104 aa)
VPS13CVacuolar protein sorting-associated protein 13C isoform X1. (3753 aa)
SORL1Sortilin-related receptor. (2211 aa)
FAM65AProtein FAM65A isoform X3. (1249 aa)
RAB6BRas-related protein Rab-6B isoform X1. (208 aa)
TMED10Transmembrane emp24 domain-containing protein 10. (219 aa)
RAB33BRas-related protein Rab-33B. (229 aa)
GCC2GRIP and coiled-coil domain-containing protein 2. (1680 aa)
COG7Conserved oligomeric Golgi complex subunit 7. (770 aa)
OPTNOptineurin. (572 aa)
VPS13AVacuolar protein sorting-associated protein 13A isoform X3. (2298 aa)
PACS1Phosphofurin acidic cluster sorting protein 1. (960 aa)
ARFRP1ADP-ribosylation factor-related protein 1. (201 aa)
ARL5AADP-ribosylation factor-like protein 5A isoform X1; Belongs to the small GTPase superfamily. Arf family. (179 aa)
CSNK1DCasein kinase I isoform delta isoform X1; Belongs to the protein kinase superfamily. (428 aa)
SYS1Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
LOC103071049LOW QUALITY PROTEIN: ADP-ribosylation factor-like protein 5C-like. (225 aa)
ARL1ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
GAKcyclin-G-associated kinase. (1278 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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