11 items (Lipotes vexillifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103082397	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	ISG20	Interferon-stimulated gene 20 kDa protein. (171 aa)
	DHX37	Probable ATP-dependent RNA helicase DHX37. (1135 aa)
	DIEXF	Digestive organ expansion factor homolog. (752 aa)
	RRP9	U3 small nucleolar RNA-interacting protein 2. (475 aa)
	NHP2L1	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
	TSR1	pre-rRNA-processing protein TSR1 homolog isoform X2. (804 aa)
	TBL3	Transducin beta-like protein 3. (797 aa)
	BMS1	Ribosome biogenesis protein BMS1 homolog. (1283 aa)
	PRKDC	DNA-dependent protein kinase catalytic subunit isoform X1; Belongs to the PI3/PI4-kinase family. (4131 aa)
	XRCC5	X-ray repair cross-complementing protein 5. (733 aa)

Your Current Organism:

Lipotes vexillifer

NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMS1	DHX37	A0A340XRI7	A0A340WP83	Ribosome biogenesis protein BMS1 homolog.	Probable ATP-dependent RNA helicase DHX37.	0.778
BMS1	DIEXF	A0A340XRI7	A0A340WXN9	Ribosome biogenesis protein BMS1 homolog.	Digestive organ expansion factor homolog.	0.599
BMS1	LOC103082397	A0A340XRI7	A0A340YHR7	Ribosome biogenesis protein BMS1 homolog.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.874
BMS1	NHP2L1	A0A340XRI7	A0A340WYL5	Ribosome biogenesis protein BMS1 homolog.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.874
BMS1	RRP9	A0A340XRI7	A0A340WXS0	Ribosome biogenesis protein BMS1 homolog.	U3 small nucleolar RNA-interacting protein 2.	0.988
BMS1	TBL3	A0A340XRI7	A0A340X133	Ribosome biogenesis protein BMS1 homolog.	Transducin beta-like protein 3.	0.996
BMS1	TSR1	A0A340XRI7	A0A340WYX5	Ribosome biogenesis protein BMS1 homolog.	pre-rRNA-processing protein TSR1 homolog isoform X2.	0.935
DHX37	BMS1	A0A340WP83	A0A340XRI7	Probable ATP-dependent RNA helicase DHX37.	Ribosome biogenesis protein BMS1 homolog.	0.778
DHX37	DIEXF	A0A340WP83	A0A340WXN9	Probable ATP-dependent RNA helicase DHX37.	Digestive organ expansion factor homolog.	0.956
DHX37	LOC103082397	A0A340WP83	A0A340YHR7	Probable ATP-dependent RNA helicase DHX37.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.472
DHX37	NHP2L1	A0A340WP83	A0A340WYL5	Probable ATP-dependent RNA helicase DHX37.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.472
DHX37	RRP9	A0A340WP83	A0A340WXS0	Probable ATP-dependent RNA helicase DHX37.	U3 small nucleolar RNA-interacting protein 2.	0.721
DHX37	TBL3	A0A340WP83	A0A340X133	Probable ATP-dependent RNA helicase DHX37.	Transducin beta-like protein 3.	0.651
DIEXF	BMS1	A0A340WXN9	A0A340XRI7	Digestive organ expansion factor homolog.	Ribosome biogenesis protein BMS1 homolog.	0.599
DIEXF	DHX37	A0A340WXN9	A0A340WP83	Digestive organ expansion factor homolog.	Probable ATP-dependent RNA helicase DHX37.	0.956
DIEXF	LOC103082397	A0A340WXN9	A0A340YHR7	Digestive organ expansion factor homolog.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.431
DIEXF	NHP2L1	A0A340WXN9	A0A340WYL5	Digestive organ expansion factor homolog.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.431
DIEXF	RRP9	A0A340WXN9	A0A340WXS0	Digestive organ expansion factor homolog.	U3 small nucleolar RNA-interacting protein 2.	0.863
DIEXF	TBL3	A0A340WXN9	A0A340X133	Digestive organ expansion factor homolog.	Transducin beta-like protein 3.	0.789
DIEXF	TSR1	A0A340WXN9	A0A340WYX5	Digestive organ expansion factor homolog.	pre-rRNA-processing protein TSR1 homolog isoform X2.	0.902