STRINGSTRING
HMGA2 HMGA2 WNT3A WNT3A ITGB4 ITGB4 NODAL NODAL ITGA2 ITGA2 ITGB3 ITGB3 KDM6A KDM6A SIX2 SIX2 EYA1 EYA1 TAF10 TAF10 ITGA8 ITGA8 TAL1 TAL1 ITGA3 ITGA3 SFRP2 SFRP2 HOXA11 HOXA11 INHBA INHBA SMAD1 SMAD1 FOXF1 FOXF1 NANOG NANOG ETV2 ETV2 BMP4 BMP4 TBX6 TBX6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HMGA2High mobility group protein HMGI-C. (109 aa)
WNT3AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
ITGB4Integrin beta. (1754 aa)
NODALNodal homolog. (349 aa)
ITGA2Integrin alpha-2; Belongs to the integrin alpha chain family. (1179 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (784 aa)
KDM6ALysine-specific demethylase 6A-like isoform X1. (1455 aa)
SIX2Homeobox protein SIX2. (296 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (594 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
ITGA8Integrin alpha-8; Belongs to the integrin alpha chain family. (1060 aa)
TAL1T-cell acute lymphocytic leukemia protein 1. (318 aa)
ITGA3Integrin alpha-3 isoform X1; Belongs to the integrin alpha chain family. (1068 aa)
SFRP2Secreted frizzled-related protein 2. (294 aa)
HOXA11Homeobox protein Hox-A11. (317 aa)
INHBALOW QUALITY PROTEIN: inhibin beta A chain. (430 aa)
SMAD1Mothers against decapentaplegic homolog. (465 aa)
FOXF1Forkhead box protein F1. (377 aa)
NANOGHomeobox protein NANOG. (306 aa)
ETV2LOW QUALITY PROTEIN: ETS translocation variant 2. (333 aa)
BMP4Bone morphogenetic protein 4 isoform X1. (420 aa)
TBX6T-box transcription factor TBX6. (436 aa)
Your Current Organism:
Lipotes vexillifer
NCBI taxonomy Id: 118797
Other names: L. vexillifer, Yangtze River dolphin, baiji
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